Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trove2O08848 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trove2O08848 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trove2O08848 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trove2O08848 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trove2O08848 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trove2O08848 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trove2O08848 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trove2O08848 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trove2O08848 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trove2O08848 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trove2O08848 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trove2O08848 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trove2O08848 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trove2O08848 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trove2O08848 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trove2O08848 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trove2O08848 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trove2O08848 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Trove2O08848 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trove2O08848 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trove2O08848 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Trove2O08848 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trove2O08848 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.08■□□□□ 0.33
Trove2O08848 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trove2O08848 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trove2O08848 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trove2O08848 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trove2O08848 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trove2O08848 Trmt13-210ENSMUST00000198454 880 ntBASIC17.08■□□□□ 0.32
Trove2O08848 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trove2O08848 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.08■□□□□ 0.32
Trove2O08848 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Trove2O08848 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trove2O08848 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Trove2O08848 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trove2O08848 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.08■□□□□ 0.32
Trove2O08848 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trove2O08848 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trove2O08848 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trove2O08848 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trove2O08848 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trove2O08848 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trove2O08848 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trove2O08848 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trove2O08848 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trove2O08848 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trove2O08848 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Trove2O08848 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trove2O08848 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trove2O08848 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trove2O08848 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.07■□□□□ 0.32
Trove2O08848 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trove2O08848 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trove2O08848 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trove2O08848 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trove2O08848 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trove2O08848 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trove2O08848 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trove2O08848 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trove2O08848 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.07■□□□□ 0.32
Trove2O08848 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trove2O08848 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.06■□□□□ 0.32
Trove2O08848 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.06■□□□□ 0.32
Trove2O08848 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.06■□□□□ 0.32
Trove2O08848 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trove2O08848 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trove2O08848 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trove2O08848 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.06■□□□□ 0.32
Trove2O08848 Gm18666-201ENSMUST00000190039 958 ntBASIC17.06■□□□□ 0.32
Trove2O08848 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.06■□□□□ 0.32
Trove2O08848 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.06■□□□□ 0.32
Trove2O08848 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trove2O08848 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trove2O08848 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trove2O08848 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trove2O08848 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trove2O08848 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trove2O08848 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trove2O08848 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trove2O08848 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.06■□□□□ 0.32
Trove2O08848 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trove2O08848 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Trove2O08848 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trove2O08848 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trove2O08848 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trove2O08848 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trove2O08848 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trove2O08848 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trove2O08848 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trove2O08848 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trove2O08848 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trove2O08848 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trove2O08848 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trove2O08848 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trove2O08848 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trove2O08848 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trove2O08848 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.05■□□□□ 0.32
Trove2O08848 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trove2O08848 Gm12527-201ENSMUST00000117967 564 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms