Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdh9F8VPK8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh9F8VPK8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh9F8VPK8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh9F8VPK8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh9F8VPK8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh9F8VPK8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.05■□□□□ 0.32
Pcdh9F8VPK8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.05■□□□□ 0.32
Pcdh9F8VPK8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdh9F8VPK8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh9F8VPK8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh9F8VPK8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdh9F8VPK8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.05■□□□□ 0.32
Pcdh9F8VPK8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh9F8VPK8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh9F8VPK8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdh9F8VPK8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh9F8VPK8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pcdh9F8VPK8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdh9F8VPK8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh9F8VPK8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Odf3b-204ENSMUST00000227834 930 ntBASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh9F8VPK8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh9F8VPK8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh9F8VPK8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh9F8VPK8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh9F8VPK8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdh9F8VPK8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh9F8VPK8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh9F8VPK8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh9F8VPK8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdh9F8VPK8 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.03■□□□□ 0.32
Pcdh9F8VPK8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh9F8VPK8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh9F8VPK8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh9F8VPK8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh9F8VPK8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh9F8VPK8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdh9F8VPK8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh9F8VPK8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh9F8VPK8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh9F8VPK8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh9F8VPK8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh9F8VPK8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh9F8VPK8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh9F8VPK8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh9F8VPK8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdh9F8VPK8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Pcdh9F8VPK8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdh9F8VPK8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh9F8VPK8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.02■□□□□ 0.31
Pcdh9F8VPK8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdh9F8VPK8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdh9F8VPK8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh9F8VPK8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms