Protein–RNA interactions for Protein: E9Q956

Mcmdc2, Minichromosome maintenance domain-containing protein 2, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mcmdc2E9Q956 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Mcmdc2E9Q956 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Mcmdc2E9Q956 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Mcmdc2E9Q956 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.27■□□□□ 0.83
Mcmdc2E9Q956 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Mcmdc2E9Q956 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Mcmdc2E9Q956 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Mcmdc2E9Q956 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Mcmdc2E9Q956 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Gm25016-201ENSMUST00000158399 131 ntBASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC20.26■□□□□ 0.83
Mcmdc2E9Q956 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mcmdc2E9Q956 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mcmdc2E9Q956 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.25■□□□□ 0.83
Mcmdc2E9Q956 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Mcmdc2E9Q956 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mcmdc2E9Q956 Gm7977-201ENSMUST00000193787 748 ntBASIC20.25■□□□□ 0.83
Mcmdc2E9Q956 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mcmdc2E9Q956 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.25■□□□□ 0.83
Mcmdc2E9Q956 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mcmdc2E9Q956 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mcmdc2E9Q956 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mcmdc2E9Q956 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mcmdc2E9Q956 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mcmdc2E9Q956 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mcmdc2E9Q956 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mcmdc2E9Q956 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mcmdc2E9Q956 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.24■□□□□ 0.83
Mcmdc2E9Q956 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mcmdc2E9Q956 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mcmdc2E9Q956 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Mcmdc2E9Q956 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mcmdc2E9Q956 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mcmdc2E9Q956 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mcmdc2E9Q956 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Mcmdc2E9Q956 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mcmdc2E9Q956 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mcmdc2E9Q956 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Mcmdc2E9Q956 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mcmdc2E9Q956 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mcmdc2E9Q956 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mcmdc2E9Q956 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Mcmdc2E9Q956 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mcmdc2E9Q956 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Mcmdc2E9Q956 Gm29518-201ENSMUST00000190858 372 ntBASIC20.22■□□□□ 0.83
Mcmdc2E9Q956 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mcmdc2E9Q956 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mcmdc2E9Q956 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mcmdc2E9Q956 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mcmdc2E9Q956 Gm15442-201ENSMUST00000117905 1527 ntBASIC20.22■□□□□ 0.83
Mcmdc2E9Q956 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mcmdc2E9Q956 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Mcmdc2E9Q956 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms