Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Actl10-202ENSMUST00000226583 1501 ntBASIC17.62■□□□□ 0.41
Rfx8D3YU81 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.62■□□□□ 0.41
Rfx8D3YU81 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx8D3YU81 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx8D3YU81 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx8D3YU81 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx8D3YU81 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Rfx8D3YU81 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx8D3YU81 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.62■□□□□ 0.41
Rfx8D3YU81 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rfx8D3YU81 Gm18101-201ENSMUST00000215769 548 ntBASIC17.62■□□□□ 0.41
Rfx8D3YU81 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx8D3YU81 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx8D3YU81 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx8D3YU81 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Rfx8D3YU81 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rfx8D3YU81 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx8D3YU81 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx8D3YU81 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx8D3YU81 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx8D3YU81 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx8D3YU81 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx8D3YU81 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx8D3YU81 Gm22697-201ENSMUST00000175194 63 ntBASIC17.61■□□□□ 0.41
Rfx8D3YU81 Gm27389-201ENSMUST00000183622 195 ntBASIC17.61■□□□□ 0.41
Rfx8D3YU81 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.61■□□□□ 0.41
Rfx8D3YU81 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.61■□□□□ 0.41
Rfx8D3YU81 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx8D3YU81 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx8D3YU81 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx8D3YU81 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rfx8D3YU81 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx8D3YU81 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx8D3YU81 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx8D3YU81 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx8D3YU81 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rfx8D3YU81 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx8D3YU81 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx8D3YU81 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rfx8D3YU81 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rfx8D3YU81 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx8D3YU81 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx8D3YU81 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.6■□□□□ 0.41
Rfx8D3YU81 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rfx8D3YU81 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Rfx8D3YU81 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx8D3YU81 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rfx8D3YU81 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.6■□□□□ 0.41
Rfx8D3YU81 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx8D3YU81 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx8D3YU81 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx8D3YU81 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx8D3YU81 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Rfx8D3YU81 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rfx8D3YU81 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx8D3YU81 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Rfx8D3YU81 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx8D3YU81 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx8D3YU81 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx8D3YU81 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx8D3YU81 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx8D3YU81 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx8D3YU81 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx8D3YU81 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Rfx8D3YU81 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx8D3YU81 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx8D3YU81 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx8D3YU81 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx8D3YU81 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx8D3YU81 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx8D3YU81 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.59■□□□□ 0.41
Rfx8D3YU81 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx8D3YU81 Gm10013-201ENSMUST00000106074 672 ntBASIC17.59■□□□□ 0.41
Rfx8D3YU81 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.59■□□□□ 0.41
Rfx8D3YU81 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
Rfx8D3YU81 Gm18032-201ENSMUST00000222541 538 ntBASIC17.59■□□□□ 0.41
Rfx8D3YU81 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx8D3YU81 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx8D3YU81 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Rfx8D3YU81 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx8D3YU81 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx8D3YU81 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx8D3YU81 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx8D3YU81 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx8D3YU81 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Rfx8D3YU81 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx8D3YU81 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Rfx8D3YU81 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rfx8D3YU81 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Rfx8D3YU81 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rfx8D3YU81 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Rfx8D3YU81 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Rfx8D3YU81 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rfx8D3YU81 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rfx8D3YU81 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx8D3YU81 Gm13186-201ENSMUST00000118031 316 ntBASIC17.58■□□□□ 0.4
Rfx8D3YU81 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx8D3YU81 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx8D3YU81 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx8D3YU81 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms