Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.16■□□□□ 0.02
Smim17A0A504 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Smim17A0A504 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim17A0A504 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smim17A0A504 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.16■□□□□ 0.02
Smim17A0A504 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim17A0A504 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.16■□□□□ 0.02
Smim17A0A504 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim17A0A504 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim17A0A504 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smim17A0A504 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim17A0A504 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim17A0A504 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.15■□□□□ 0.02
Smim17A0A504 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim17A0A504 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Smim17A0A504 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim17A0A504 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Smim17A0A504 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim17A0A504 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim17A0A504 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim17A0A504 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Smim17A0A504 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim17A0A504 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim17A0A504 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim17A0A504 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smim17A0A504 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.15■□□□□ 0.02
Smim17A0A504 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Smim17A0A504 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim17A0A504 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim17A0A504 Gm26833-201ENSMUST00000180899 440 ntBASIC15.15■□□□□ 0.02
Smim17A0A504 Gm43173-201ENSMUST00000202246 593 ntBASIC15.15■□□□□ 0.02
Smim17A0A504 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim17A0A504 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim17A0A504 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim17A0A504 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.15■□□□□ 0.02
Smim17A0A504 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smim17A0A504 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smim17A0A504 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smim17A0A504 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Smim17A0A504 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smim17A0A504 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smim17A0A504 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Smim17A0A504 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smim17A0A504 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smim17A0A504 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Smim17A0A504 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smim17A0A504 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Smim17A0A504 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smim17A0A504 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smim17A0A504 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smim17A0A504 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smim17A0A504 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smim17A0A504 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Smim17A0A504 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.14■□□□□ 0.01
Smim17A0A504 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim17A0A504 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim17A0A504 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim17A0A504 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.13■□□□□ 0.01
Smim17A0A504 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smim17A0A504 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim17A0A504 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim17A0A504 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Smim17A0A504 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim17A0A504 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim17A0A504 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim17A0A504 Gm40848-201ENSMUST00000221998 324 ntBASIC15.13■□□□□ 0.01
Smim17A0A504 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim17A0A504 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim17A0A504 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.13■□□□□ 0.01
Smim17A0A504 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim17A0A504 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Smim17A0A504 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Smim17A0A504 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim17A0A504 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Smim17A0A504 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Smim17A0A504 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim17A0A504 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Smim17A0A504 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim17A0A504 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim17A0A504 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim17A0A504 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Smim17A0A504 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim17A0A504 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smim17A0A504 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Smim17A0A504 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smim17A0A504 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smim17A0A504 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smim17A0A504 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smim17A0A504 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smim17A0A504 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Smim17A0A504 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Smim17A0A504 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smim17A0A504 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smim17A0A504 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smim17A0A504 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smim17A0A504 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smim17A0A504 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smim17A0A504 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.12■□□□□ 0.01
Smim17A0A504 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.12■□□□□ 0.01
Smim17A0A504 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms