Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
Mindy4b-psA0A1W2P7H6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.58■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.58■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.58■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.57■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.57■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.56■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.56■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.56■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.55■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.55■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Gm14859-201ENSMUST00000117752 357 ntBASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Gm45328-201ENSMUST00000210942 917 ntBASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mindy4b-psA0A1W2P7H6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms