Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gm12933-201ENSMUST00000120203 872 ntBASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gm37179-201ENSMUST00000194862 823 ntBASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gm13158-201ENSMUST00000122007 736 ntBASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 AC166341.7-201ENSMUST00000221698 126 ntBASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gm10602-201ENSMUST00000098239 609 ntBASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms