Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-28A0A0G2JE47 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-28A0A0G2JE47 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-28A0A0G2JE47 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-28A0A0G2JE47 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-28A0A0G2JE47 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-28A0A0G2JE47 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Igkv8-28A0A0G2JE47 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-28A0A0G2JE47 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.73
Igkv8-28A0A0G2JE47 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
Igkv8-28A0A0G2JE47 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-28A0A0G2JE47 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC10.46□□□□□ -0.73
Igkv8-28A0A0G2JE47 Gm13534-201ENSMUST00000121169 513 ntBASIC10.46□□□□□ -0.73
Igkv8-28A0A0G2JE47 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC10.46□□□□□ -0.73
Igkv8-28A0A0G2JE47 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv8-28A0A0G2JE47 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Igkv8-28A0A0G2JE47 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-28A0A0G2JE47 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-28A0A0G2JE47 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-28A0A0G2JE47 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC10.46□□□□□ -0.74
Igkv8-28A0A0G2JE47 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-28A0A0G2JE47 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-28A0A0G2JE47 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-28A0A0G2JE47 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-28A0A0G2JE47 AC153526.5-201ENSMUST00000218661 2147 ntBASIC10.46□□□□□ -0.74
Igkv8-28A0A0G2JE47 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-28A0A0G2JE47 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Igkv8-28A0A0G2JE47 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-28A0A0G2JE47 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-28A0A0G2JE47 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Igkv8-28A0A0G2JE47 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-28A0A0G2JE47 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-28A0A0G2JE47 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv8-28A0A0G2JE47 Gm38042-201ENSMUST00000191614 5208 ntBASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Gm10418-201ENSMUST00000100943 576 ntBASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Gm13146-201ENSMUST00000118508 780 ntBASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Igkv8-28A0A0G2JE47 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Gm2011-201ENSMUST00000203124 1263 ntBASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv8-28A0A0G2JE47 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Igkv8-28A0A0G2JE47 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms