Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Gm24841-201ENSMUST00000158676 357 ntBASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Haglr-201ENSMUST00000100000 2085 ntBASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Gm2274-201ENSMUST00000184539 609 ntBASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.41□□□□□ -0.42
Trbv13-1A0A0B4J1P8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms