Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Trav4-3A0A0B4J1K1 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 AC140264.2-202ENSMUST00000218746 817 ntBASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Reep4-203ENSMUST00000226563 1444 ntBASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4-3A0A0B4J1K1 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Trav4-3A0A0B4J1K1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 AC140930.3-201ENSMUST00000222935 274 ntBASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4-3A0A0B4J1K1 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms