Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav21-dv12A0A075B6C4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gm18958-201ENSMUST00000174258 762 ntBASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Timm23-208ENSMUST00000226683 750 ntBASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav21-dv12A0A075B6C4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms