Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav6-4A0A075B6B4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Gm27389-201ENSMUST00000183622 195 ntBASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-4A0A075B6B4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Actl10-202ENSMUST00000226583 1501 ntBASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Gm22697-201ENSMUST00000175194 63 ntBASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Gm18101-201ENSMUST00000215769 548 ntBASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-4A0A075B6B4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-4A0A075B6B4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav6-4A0A075B6B4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav6-4A0A075B6B4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-4A0A075B6B4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav6-4A0A075B6B4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-4A0A075B6B4 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-4A0A075B6B4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-4A0A075B6B4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-4A0A075B6B4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-4A0A075B6B4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-4A0A075B6B4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms