Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Gm18958-201ENSMUST00000174258 762 ntBASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav9d-3A0A075B695 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-3A0A075B695 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav9d-3A0A075B695 Gm43548-201ENSMUST00000197139 2353 ntBASIC11.86□□□□□ -0.51
Trav9d-3A0A075B695 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav9d-3A0A075B695 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-3A0A075B695 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-3A0A075B695 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-3A0A075B695 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav9d-3A0A075B695 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-3A0A075B695 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-3A0A075B695 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-3A0A075B695 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms