Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav16A0A075B653 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16A0A075B653 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.9□□□□□ -0.34
Trav16A0A075B653 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trav16A0A075B653 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav16A0A075B653 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16A0A075B653 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16A0A075B653 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16A0A075B653 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16A0A075B653 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav16A0A075B653 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.9□□□□□ -0.34
Trav16A0A075B653 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16A0A075B653 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16A0A075B653 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav16A0A075B653 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16A0A075B653 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.9□□□□□ -0.34
Trav16A0A075B653 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16A0A075B653 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16A0A075B653 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16A0A075B653 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16A0A075B653 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16A0A075B653 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16A0A075B653 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16A0A075B653 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16A0A075B653 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav16A0A075B653 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav16A0A075B653 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Gm42642-201ENSMUST00000200683 355 ntBASIC12.89□□□□□ -0.35
Trav16A0A075B653 AV356131-201ENSMUST00000206201 750 ntBASIC12.89□□□□□ -0.35
Trav16A0A075B653 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16A0A075B653 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16A0A075B653 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav16A0A075B653 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16A0A075B653 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16A0A075B653 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16A0A075B653 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav16A0A075B653 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav16A0A075B653 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16A0A075B653 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16A0A075B653 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16A0A075B653 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16A0A075B653 Gm11927-201ENSMUST00000118472 759 ntBASIC12.88□□□□□ -0.35
Trav16A0A075B653 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav16A0A075B653 Mir6349-201ENSMUST00000184059 97 ntBASIC12.88□□□□□ -0.35
Trav16A0A075B653 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav16A0A075B653 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16A0A075B653 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16A0A075B653 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16A0A075B653 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav16A0A075B653 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16A0A075B653 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16A0A075B653 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16A0A075B653 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16A0A075B653 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16A0A075B653 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16A0A075B653 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16A0A075B653 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16A0A075B653 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Trav16A0A075B653 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16A0A075B653 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16A0A075B653 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16A0A075B653 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16A0A075B653 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav16A0A075B653 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16A0A075B653 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms