Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-2A0A075B649 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Sybu-209ENSMUST00000228639 4113 ntBASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trav13-2A0A075B649 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13-2A0A075B649 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC11.21□□□□□ -0.62
Trav13-2A0A075B649 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13-2A0A075B649 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Trav13-2A0A075B649 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
Trav13-2A0A075B649 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13-2A0A075B649 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13-2A0A075B649 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.21□□□□□ -0.62
Trav13-2A0A075B649 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.21□□□□□ -0.62
Trav13-2A0A075B649 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13-2A0A075B649 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC11.21□□□□□ -0.62
Trav13-2A0A075B649 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms