Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Gm10517-202ENSMUST00000192970 758 ntBASIC14.19□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Gm37025-201ENSMUST00000195159 829 ntBASIC14.19□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Gm17661-201ENSMUST00000170317 270 ntBASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Gm37292-201ENSMUST00000192062 758 ntBASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms