Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav16d-dv11A0A075B617 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav16d-dv11A0A075B617 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trav16d-dv11A0A075B617 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav16d-dv11A0A075B617 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav16d-dv11A0A075B617 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trav16d-dv11A0A075B617 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trav16d-dv11A0A075B617 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav16d-dv11A0A075B617 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav16d-dv11A0A075B617 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16d-dv11A0A075B617 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16d-dv11A0A075B617 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16d-dv11A0A075B617 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav16d-dv11A0A075B617 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16d-dv11A0A075B617 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16d-dv11A0A075B617 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16d-dv11A0A075B617 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16d-dv11A0A075B617 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav16d-dv11A0A075B617 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav16d-dv11A0A075B617 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16d-dv11A0A075B617 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav16d-dv11A0A075B617 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16d-dv11A0A075B617 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16d-dv11A0A075B617 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16d-dv11A0A075B617 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
Trav16d-dv11A0A075B617 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Trav16d-dv11A0A075B617 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16d-dv11A0A075B617 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16d-dv11A0A075B617 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16d-dv11A0A075B617 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16d-dv11A0A075B617 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav16d-dv11A0A075B617 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Gm27454-201ENSMUST00000185090 204 ntBASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Appbp2os-202ENSMUST00000206972 447 ntBASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Trav16d-dv11A0A075B617 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms