Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-5A0A075B604 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-5A0A075B604 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-5A0A075B604 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-5A0A075B604 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-5A0A075B604 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav7n-5A0A075B604 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-5A0A075B604 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-5A0A075B604 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-5A0A075B604 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-5A0A075B604 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-5A0A075B604 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav7n-5A0A075B604 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-5A0A075B604 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-5A0A075B604 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Trav7n-5A0A075B604 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav7n-5A0A075B604 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-5A0A075B604 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-5A0A075B604 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-5A0A075B604 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-5A0A075B604 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav7n-5A0A075B604 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trav7n-5A0A075B604 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Gm18421-201ENSMUST00000204122 625 ntBASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-5A0A075B604 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-5A0A075B604 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7n-5A0A075B604 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav7n-5A0A075B604 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7n-5A0A075B604 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7n-5A0A075B604 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav7n-5A0A075B604 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.62□□□□□ -0.23
Trav7n-5A0A075B604 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.62□□□□□ -0.23
Trav7n-5A0A075B604 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7n-5A0A075B604 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7n-5A0A075B604 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7n-5A0A075B604 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7n-5A0A075B604 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7n-5A0A075B604 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7n-5A0A075B604 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.62□□□□□ -0.23
Trav7n-5A0A075B604 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.62□□□□□ -0.23
Trav7n-5A0A075B604 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7n-5A0A075B604 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav7n-5A0A075B604 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav7n-5A0A075B604 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms