Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 Gm9731-201ENSMUST00000209480 747 ntBASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Gm18666-201ENSMUST00000190039 958 ntBASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-1A0A075B5Z8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-1A0A075B5Z8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms