Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Mir1668-201ENSMUST00000184114 107 ntBASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-55A0A075B5W6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Gm10566-201ENSMUST00000086739 996 ntBASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ighv1-55A0A075B5W6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 Gm18115-201ENSMUST00000221209 621 ntBASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 Haglr-201ENSMUST00000100000 2085 ntBASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-55A0A075B5W6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms