Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 MIR320B1-201ENST00000390209 79 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 AC105402.1-201ENST00000413336 545 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 ELOCP9-201ENST00000418624 239 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 AC005033.1-201ENST00000428904 813 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 YWHAEP5-201ENST00000431545 765 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 OR52B5P-201ENST00000435337 951 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 Z80107.2-201ENST00000445127 392 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 CASP3P1-201ENST00000446037 609 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 RN7SL447P-201ENST00000494711 245 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 RPL5P23-201ENST00000496040 868 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 AC008565.1-201ENST00000509046 885 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 AC109464.1-201ENST00000511091 819 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 RFPL4AP5-201ENST00000514977 504 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 AP001922.4-201ENST00000526967 290 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 OR8G3P-201ENST00000533406 921 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 AGGF1P6-201ENST00000569213 976 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 MIR4675-201ENST00000577898 77 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 AC008088.1-201ENST00000580993 280 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 AC233702.9-201ENST00000581528 203 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 AC016877.3-201ENST00000606778 504 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 OR52B5P-202ENST00000641118 1110 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 AC111188.2-201ENST00000529697 1387 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AC093775.1-201ENST00000624154 1868 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 SNORA56-201ENST00000383966 129 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AL035419.1-201ENST00000397037 564 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 USP9YP11-201ENST00000427537 717 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AC090018.1-201ENST00000434369 367 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 OR6D1P-201ENST00000436165 939 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 RPS11P7-201ENST00000442125 465 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 ARL5AP2-201ENST00000444698 533 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AL450023.1-201ENST00000450868 751 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 OR52E3P-201ENST00000452083 936 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 VDAC2P4-201ENST00000452925 711 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AL122001.1-201ENST00000457027 370 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 RPL7P6-201ENST00000480903 738 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 RPL7P40-201ENST00000481703 745 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 MTND2P14-201ENST00000482139 351 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AC109462.1-201ENST00000491087 368 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AL049874.2-201ENST00000492636 288 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AC093890.1-201ENST00000502554 540 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AC091860.1-201ENST00000505723 432 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AC105313.1-201ENST00000509121 353 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 OR51K1P-201ENST00000510214 950 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AC092709.1-201ENST00000521355 1045 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AC025260.1-201ENST00000548858 430 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AC069366.1-201ENST00000583159 838 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AC015688.2-201ENST00000584523 262 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AC091057.2-201ENST00000602594 792 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AC125494.3-201ENST00000602759 455 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 MTND3P19-201ENST00000603825 345 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AC133644.2-201ENST00000608142 540 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.14□□□□□ -1.59
VPS4AQ9UN37 AC024595.1-201ENST00000623088 387 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms