Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 SNURFL-201ENST00000309296 343 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 U3.2-201ENST00000362981 210 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 RNU6-984P-201ENST00000363236 109 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 Z86062.1-201ENST00000406773 777 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 SPRYD7P1-201ENST00000443861 570 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 CCDC75P1-201ENST00000469247 791 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AC078857.1-201ENST00000469870 667 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 RN7SL184P-201ENST00000488308 297 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AC139783.2-201ENST00000504847 1145 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AC106872.4-201ENST00000510050 523 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 SNORA76.2-201ENST00000517095 137 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AC133555.2-201ENST00000550213 292 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AC093510.2-201ENST00000562820 896 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AC022726.1-201ENST00000587475 207 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AC090330.1-201ENST00000588646 764 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 BNIP3P27-201ENST00000599991 412 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AC068790.5-201ENST00000602741 355 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AP002360.3-201ENST00000607673 710 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AC067931.1-201ENST00000624190 671 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AL356121.2-201ENST00000624715 780 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 CASC19-264ENST00000641912 1184 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AC017002.4-201ENST00000604721 1525 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AC135352.1-201ENST00000506173 1418 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AC010132.2-201ENST00000295493 1043 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 RNA5SP513-201ENST00000364648 118 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 RNA5SP151-201ENST00000365632 117 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 MIR708-201ENST00000390708 88 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 Z98745.1-201ENST00000402553 494 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AP002530.1-201ENST00000405705 684 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 RN7SKP206-201ENST00000410823 293 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AC009302.1-201ENST00000417147 390 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 HSFY1P1-201ENST00000423928 1178 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 UBE2D3P3-201ENST00000426992 425 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 PTP4A1P3-201ENST00000433661 420 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 H2AFZP5-201ENST00000446960 382 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AL935212.3-201ENST00000450729 284 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 RPL23AP2-201ENST00000471227 466 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 VWA8P1-201ENST00000510889 176 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 BX510359.5-201ENST00000515651 304 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AC093014.1-201ENST00000548926 724 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms