Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ZSCAN12P1-201ENST00000406489 419 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 VN1R8P-201ENST00000407739 893 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 DPPA2P3-201ENST00000411853 655 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 GTF2IP5-201ENST00000414608 731 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 BMS1P13-201ENST00000417301 885 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 SKP1P3-201ENST00000429280 487 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 CFL1P1-202ENST00000432948 411 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 RPL7P33-201ENST00000444159 742 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AC023141.9-201ENST00000458734 412 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 RPL23AP56-201ENST00000460778 453 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 SYT14P1-201ENST00000481459 721 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 RN7SL741P-201ENST00000482473 289 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AC008897.1-201ENST00000494006 347 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AC025164.1-201ENST00000496249 478 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 MTATP6P1-201ENST00000514057 681 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 RNA5SP446-201ENST00000515955 82 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AC069240.1-201ENST00000548774 375 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AC011447.4-201ENST00000587562 111 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 ZNF92P3-201ENST00000596594 954 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AC010680.3-201ENST00000604215 520 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AC025175.1-201ENST00000606482 759 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 CR589904.2-201ENST00000612533 440 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AL627230.1-201ENST00000613077 211 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AC091905.2-201ENST00000623143 306 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 CR381572.2-201ENST00000624852 397 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 MTND4P26-201ENST00000415971 1359 ntBASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.07□□□□□ -1.92
SND1-IT1Q9HBX3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 AC107977.1-201ENST00000355745 939 ntBASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 RHOT1P2-201ENST00000366423 333 ntBASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 MIR143-201ENST00000385300 106 ntBASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 MIR708-201ENST00000390708 88 ntBASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 AC006971.1-201ENST00000407916 4486 ntBASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 OR3A2-201ENST00000408891 1076 ntBASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 AC114755.2-201ENST00000413520 361 ntBASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 UBTFL3-201ENST00000418934 1024 ntBASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 AL590623.1-201ENST00000427864 105 ntBASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 AC245047.2-201ENST00000441060 530 ntBASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 AC114878.1-201ENST00000441166 358 ntBASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 SLC25A18P1-201ENST00000449385 454 ntBASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 FAR2P1-206ENST00000449736 709 ntBASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 UBTFL6-201ENST00000477929 1024 ntBASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 AL161747.1-201ENST00000480068 358 ntBASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 AC090013.1-201ENST00000485147 480 ntBASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 RPL30P11-201ENST00000495304 339 ntBASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 HMGB1P21-201ENST00000502313 581 ntBASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 FTH1P24-201ENST00000503502 462 ntBASIC3.06□□□□□ -1.92
SND1-IT1Q9HBX3 AC111193.1-201ENST00000504097 155 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms