Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LITAFQ99732 AC007204.2-201ENST00000615022 616 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 AC090607.5-201ENST00000615692 224 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.65□□□□□ -1.83
LITAFQ99732 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LITAFQ99732 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
LITAFQ99732 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.65□□□□□ -1.83
LITAFQ99732 AC068213.1-201ENST00000625124 226 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC3.65□□□□□ -1.83
LITAFQ99732 AC087565.3-203ENST00000641018 837 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.65□□□□□ -1.83
LITAFQ99732 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LITAFQ99732 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LITAFQ99732 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC3.65□□□□□ -1.83
LITAFQ99732 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
LITAFQ99732 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LITAFQ99732 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LITAFQ99732 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC3.65□□□□□ -1.83
LITAFQ99732 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LITAFQ99732 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC3.65□□□□□ -1.83
LITAFQ99732 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC3.65□□□□□ -1.83
LITAFQ99732 AC083843.2-201ENST00000568248 6253 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.65□□□□□ -1.83
LITAFQ99732 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC3.65□□□□□ -1.83
LITAFQ99732 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
LITAFQ99732 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC3.65□□□□□ -1.83
LITAFQ99732 ASNSP1-204ENST00000641977 1664 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LITAFQ99732 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LITAFQ99732 LYARP1-201ENST00000436977 1501 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
LITAFQ99732 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
LITAFQ99732 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
LITAFQ99732 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
LITAFQ99732 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
LITAFQ99732 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LITAFQ99732 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LITAFQ99732 AL672167.1-206ENST00000356293 943 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 RNA5SP429-201ENST00000363688 109 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 SNORA4.1-201ENST00000364263 144 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 ADIG-201ENST00000373348 430 ntTSL 2 BASIC3.64□□□□□ -1.83
LITAFQ99732 AC013442.1-201ENST00000397347 228 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 VDAC2P1-201ENST00000399358 958 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.64□□□□□ -1.83
LITAFQ99732 RPL7P8-201ENST00000411964 730 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.64□□□□□ -1.83
LITAFQ99732 AL450992.3-201ENST00000413192 568 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 RPS6P23-201ENST00000413224 722 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.64□□□□□ -1.83
LITAFQ99732 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC3.64□□□□□ -1.83
LITAFQ99732 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.64□□□□□ -1.83
LITAFQ99732 AC007559.1-201ENST00000428736 355 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC3.64□□□□□ -1.83
LITAFQ99732 RPL31P54-201ENST00000429803 370 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LITAFQ99732 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
LITAFQ99732 AC008072.1-201ENST00000434254 824 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 RPS25P9-201ENST00000435591 252 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 TUBB4BP6-201ENST00000437576 479 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 CBX1P4-201ENST00000439415 457 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 MTCO1P19-201ENST00000443487 500 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 RPS7P4-201ENST00000444127 582 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 AL137845.2-201ENST00000444292 988 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC3.64□□□□□ -1.83
LITAFQ99732 RPL7AP52-201ENST00000458096 790 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 RPL23AP12-201ENST00000467573 473 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 RPL23AP71-201ENST00000470966 469 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 RN7SL583P-201ENST00000475692 287 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC3.64□□□□□ -1.83
LITAFQ99732 RPL12P30-201ENST00000488389 499 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 AC104685.1-201ENST00000502445 371 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.64□□□□□ -1.83
LITAFQ99732 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LITAFQ99732 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC3.64□□□□□ -1.83
LITAFQ99732 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.64□□□□□ -1.83
LITAFQ99732 ATP1B1P1-201ENST00000509767 915 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 LTV1P1-201ENST00000510683 1237 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.64□□□□□ -1.83
LITAFQ99732 RNU2-30P-201ENST00000516209 141 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC3.64□□□□□ -1.83
LITAFQ99732 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.64□□□□□ -1.83
LITAFQ99732 IGKV2-36-201ENST00000519999 223 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.64□□□□□ -1.83
LITAFQ99732 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC3.64□□□□□ -1.83
LITAFQ99732 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC3.64□□□□□ -1.83
LITAFQ99732 SMARCE1P4-201ENST00000523647 241 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 AC130366.1-201ENST00000526505 1192 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.64□□□□□ -1.83
LITAFQ99732 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC3.64□□□□□ -1.83
LITAFQ99732 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC3.64□□□□□ -1.83
LITAFQ99732 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.64□□□□□ -1.83
LITAFQ99732 OR8G3P-201ENST00000533406 921 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC3.64□□□□□ -1.83
LITAFQ99732 VDAC2P2-201ENST00000544463 901 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 AC004217.3-201ENST00000551552 878 ntBASIC3.64□□□□□ -1.83
LITAFQ99732 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC3.64□□□□□ -1.83
LITAFQ99732 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC3.64□□□□□ -1.83
LITAFQ99732 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms