Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 OR5AN2P-201ENST00000534535 896 ntBASIC4.19□□□□□ -1.74
COL21A1Q96P44 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 BPIFA4P-203ENST00000603168 689 ntBASIC4.19□□□□□ -1.74
COL21A1Q96P44 AC008638.3-201ENST00000603341 463 ntBASIC4.19□□□□□ -1.74
COL21A1Q96P44 AC010201.1-201ENST00000605051 540 ntBASIC4.19□□□□□ -1.74
COL21A1Q96P44 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 AC100847.1-201ENST00000611316 481 ntBASIC4.19□□□□□ -1.74
COL21A1Q96P44 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.19□□□□□ -1.74
COL21A1Q96P44 RN7SL722P-201ENST00000617780 284 ntBASIC4.19□□□□□ -1.74
COL21A1Q96P44 RN7SL565P-201ENST00000618246 284 ntBASIC4.19□□□□□ -1.74
COL21A1Q96P44 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 LINC01808-202ENST00000641680 1116 ntBASIC4.19□□□□□ -1.74
COL21A1Q96P44 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 AC010300.1-201ENST00000600671 5134 ntBASIC4.19□□□□□ -1.74
COL21A1Q96P44 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL21A1Q96P44 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL21A1Q96P44 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL21A1Q96P44 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 RNU4-7P-201ENST00000364758 141 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL21A1Q96P44 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL21A1Q96P44 GLULP6-201ENST00000399502 913 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 AC004552.1-201ENST00000419089 348 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 AC092570.3-201ENST00000420113 693 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 AC073335.1-201ENST00000427776 363 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 CDY14P-201ENST00000431260 1014 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 CDY12P-201ENST00000440679 1015 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 AL353748.1-201ENST00000440753 474 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 CDY13P-201ENST00000445813 1015 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 NPM1P39-201ENST00000449818 867 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 CDY23P-201ENST00000451661 1014 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 HMGN1P8-201ENST00000463578 288 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 AC092905.1-201ENST00000467527 949 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 RPS26P3-201ENST00000470205 348 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 AC090543.2-201ENST00000483963 348 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 AC004057.1-201ENST00000485827 348 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 AC117525.1-201ENST00000515228 503 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 RN7SKP92-201ENST00000517266 244 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL21A1Q96P44 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 CR383656.6-201ENST00000550518 394 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 ADAM3B-201ENST00000569937 840 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 FAM106CP-201ENST00000582212 507 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 OR1AB1P-201ENST00000585564 761 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 AC234771.5-201ENST00000600161 514 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 AC004241.3-201ENST00000611728 517 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 AL590410.1-201ENST00000617925 333 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 AP005019.3-201ENST00000620418 560 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 MIR7703-201ENST00000620784 77 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 LINC00622-201ENST00000562811 1570 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 AL592148.3-201ENST00000608771 2646 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.18□□□□□ -1.74
COL21A1Q96P44 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
COL21A1Q96P44 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL21A1Q96P44 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL21A1Q96P44 AC110792.3-201ENST00000595906 1614 ntBASIC4.17□□□□□ -1.74
COL21A1Q96P44 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL21A1Q96P44 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.17□□□□□ -1.74
COL21A1Q96P44 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL21A1Q96P44 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL21A1Q96P44 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.17□□□□□ -1.74
COL21A1Q96P44 MFSD8-216ENST00000641147 4009 ntBASIC4.17□□□□□ -1.74
COL21A1Q96P44 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.17□□□□□ -1.74
COL21A1Q96P44 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
COL21A1Q96P44 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL21A1Q96P44 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
COL21A1Q96P44 AL078604.1-201ENST00000404609 466 ntBASIC4.17□□□□□ -1.74
COL21A1Q96P44 AC073136.2-201ENST00000417282 849 ntBASIC4.17□□□□□ -1.74
COL21A1Q96P44 AC006065.1-201ENST00000422539 802 ntBASIC4.17□□□□□ -1.74
COL21A1Q96P44 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms