Protein–RNA interactions for Protein: Q00341

HDLBP, Vigilin, humanhuman

Known RBP Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBPQ00341 AC080014.1-201ENST00000496877 1201 ntBASIC6.74□□□□□ -1.33
HDLBPQ00341 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC6.74□□□□□ -1.33
HDLBPQ00341 AC104685.1-201ENST00000502445 371 ntBASIC6.74□□□□□ -1.33
HDLBPQ00341 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC6.74□□□□□ -1.33
HDLBPQ00341 RN7SKP31-201ENST00000516354 278 ntBASIC6.74□□□□□ -1.33
HDLBPQ00341 IGLV3-24-201ENST00000517477 197 ntBASIC6.74□□□□□ -1.33
HDLBPQ00341 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC6.74□□□□□ -1.33
HDLBPQ00341 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC6.74□□□□□ -1.33
HDLBPQ00341 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
HDLBPQ00341 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC6.74□□□□□ -1.33
HDLBPQ00341 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC6.74□□□□□ -1.33
HDLBPQ00341 AC115085.1-201ENST00000588924 229 ntBASIC6.74□□□□□ -1.33
HDLBPQ00341 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.74□□□□□ -1.33
HDLBPQ00341 AC006270.3-201ENST00000605967 1036 ntBASIC6.74□□□□□ -1.33
HDLBPQ00341 AC091946.2-201ENST00000606105 291 ntBASIC6.74□□□□□ -1.33
HDLBPQ00341 AC092653.1-201ENST00000608509 531 ntBASIC6.74□□□□□ -1.33
HDLBPQ00341 AC000068.2-201ENST00000608816 460 ntBASIC6.74□□□□□ -1.33
HDLBPQ00341 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC6.74□□□□□ -1.33
HDLBPQ00341 AC118658.2-201ENST00000618697 459 ntBASIC6.74□□□□□ -1.33
HDLBPQ00341 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC6.74□□□□□ -1.33
HDLBPQ00341 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HDLBPQ00341 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
HDLBPQ00341 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6.74□□□□□ -1.33
HDLBPQ00341 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HDLBPQ00341 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HDLBPQ00341 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
HDLBPQ00341 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.74□□□□□ -1.33
HDLBPQ00341 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
HDLBPQ00341 AC015799.1-201ENST00000622996 3122 ntBASIC6.74□□□□□ -1.33
HDLBPQ00341 ANKRD20A17P-201ENST00000511745 1330 ntBASIC6.74□□□□□ -1.33
HDLBPQ00341 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HDLBPQ00341 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HDLBPQ00341 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HDLBPQ00341 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HDLBPQ00341 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HDLBPQ00341 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
HDLBPQ00341 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDLBPQ00341 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HDLBPQ00341 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.73□□□□□ -1.33
HDLBPQ00341 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDLBPQ00341 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
HDLBPQ00341 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDLBPQ00341 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HDLBPQ00341 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
HDLBPQ00341 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDLBPQ00341 AC005294.1-201ENST00000355509 281 ntBASIC6.73□□□□□ -1.33
HDLBPQ00341 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.73□□□□□ -1.33
HDLBPQ00341 NUDT19P3-201ENST00000404698 555 ntBASIC6.73□□□□□ -1.33
HDLBPQ00341 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.73□□□□□ -1.33
HDLBPQ00341 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HDLBPQ00341 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.73□□□□□ -1.33
HDLBPQ00341 RPL35AP24-201ENST00000413846 330 ntBASIC6.73□□□□□ -1.33
HDLBPQ00341 TIMM9P2-201ENST00000419324 266 ntBASIC6.73□□□□□ -1.33
HDLBPQ00341 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC6.73□□□□□ -1.33
HDLBPQ00341 OR52B5P-201ENST00000435337 951 ntBASIC6.73□□□□□ -1.33
HDLBPQ00341 MTND2P40-201ENST00000436718 841 ntBASIC6.73□□□□□ -1.33
HDLBPQ00341 MTCO2P16-201ENST00000436962 677 ntBASIC6.73□□□□□ -1.33
HDLBPQ00341 AL591363.1-201ENST00000450091 483 ntBASIC6.73□□□□□ -1.33
HDLBPQ00341 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.73□□□□□ -1.33
HDLBPQ00341 RPL21P71-201ENST00000465598 459 ntBASIC6.73□□□□□ -1.33
HDLBPQ00341 RN7SL329P-201ENST00000467740 299 ntBASIC6.73□□□□□ -1.33
HDLBPQ00341 RPS6P4-201ENST00000494693 758 ntBASIC6.73□□□□□ -1.33
HDLBPQ00341 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC6.73□□□□□ -1.33
HDLBPQ00341 AC008494.2-201ENST00000514544 370 ntBASIC6.73□□□□□ -1.33
HDLBPQ00341 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC6.73□□□□□ -1.33
HDLBPQ00341 snoU109.6-201ENST00000516831 118 ntBASIC6.73□□□□□ -1.33
HDLBPQ00341 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC6.73□□□□□ -1.33
HDLBPQ00341 SMARCE1P4-201ENST00000523647 241 ntBASIC6.73□□□□□ -1.33
HDLBPQ00341 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.73□□□□□ -1.33
HDLBPQ00341 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.73□□□□□ -1.33
HDLBPQ00341 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.73□□□□□ -1.33
HDLBPQ00341 MIR4420-201ENST00000583944 77 ntBASIC6.73□□□□□ -1.33
HDLBPQ00341 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.73□□□□□ -1.33
HDLBPQ00341 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.73□□□□□ -1.33
HDLBPQ00341 AC023813.4-201ENST00000607580 580 ntBASIC6.73□□□□□ -1.33
HDLBPQ00341 AC245297.2-201ENST00000610119 565 ntBASIC6.73□□□□□ -1.33
HDLBPQ00341 AL133243.1-201ENST00000614487 366 ntBASIC6.73□□□□□ -1.33
HDLBPQ00341 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.73□□□□□ -1.33
HDLBPQ00341 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDLBPQ00341 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HDLBPQ00341 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC6.73□□□□□ -1.33
HDLBPQ00341 PDCD6IPP1-202ENST00000622242 1064 ntBASIC6.73□□□□□ -1.33
HDLBPQ00341 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
HDLBPQ00341 AC099654.6-201ENST00000636487 512 ntBASIC6.73□□□□□ -1.33
HDLBPQ00341 OR52B5P-202ENST00000641118 1110 ntBASIC6.73□□□□□ -1.33
HDLBPQ00341 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
HDLBPQ00341 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDLBPQ00341 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
HDLBPQ00341 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDLBPQ00341 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.73□□□□□ -1.33
HDLBPQ00341 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDLBPQ00341 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
HDLBPQ00341 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDLBPQ00341 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDLBPQ00341 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC6.73□□□□□ -1.33
HDLBPQ00341 AL390862.1-201ENST00000635467 1469 ntBASIC6.73□□□□□ -1.33
HDLBPQ00341 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
HDLBPQ00341 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HDLBPQ00341 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.72□□□□□ -1.33
HDLBPQ00341 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms