Protein–RNA interactions for Protein: P63316

TNNC1, Troponin C, slow skeletal and cardiac muscles, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNC1P63316 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.74□□□□□ -1.65
TNNC1P63316 C1GALT1P3-201ENST00000522049 819 ntBASIC4.74□□□□□ -1.65
TNNC1P63316 MIR4284-201ENST00000578924 81 ntBASIC4.74□□□□□ -1.65
TNNC1P63316 MIR6891-201ENST00000618788 93 ntBASIC4.74□□□□□ -1.65
TNNC1P63316 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TNNC1P63316 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TNNC1P63316 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
TNNC1P63316 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TNNC1P63316 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TNNC1P63316 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TNNC1P63316 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
TNNC1P63316 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
TNNC1P63316 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.74□□□□□ -1.65
TNNC1P63316 AC090017.1-201ENST00000548612 1779 ntBASIC4.73□□□□□ -1.65
TNNC1P63316 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.73□□□□□ -1.65
TNNC1P63316 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
TNNC1P63316 AC011266.1-201ENST00000624119 3569 ntBASIC4.73□□□□□ -1.65
TNNC1P63316 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.73□□□□□ -1.65
TNNC1P63316 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TNNC1P63316 AC008033.1-201ENST00000216407 1162 ntBASIC4.73□□□□□ -1.65
TNNC1P63316 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TNNC1P63316 RNA5SP443-201ENST00000363083 132 ntBASIC4.73□□□□□ -1.65
TNNC1P63316 RNU6-1331P-201ENST00000363658 106 ntBASIC4.73□□□□□ -1.65
TNNC1P63316 RHOT1P2-201ENST00000366423 333 ntBASIC4.73□□□□□ -1.65
TNNC1P63316 OR13C3-201ENST00000374781 1108 ntBASIC4.73□□□□□ -1.65
TNNC1P63316 U3.22-201ENST00000391120 215 ntBASIC4.73□□□□□ -1.65
TNNC1P63316 RPS24P12-201ENST00000402084 394 ntBASIC4.73□□□□□ -1.65
TNNC1P63316 Y_RNA.625-201ENST00000411256 107 ntBASIC4.73□□□□□ -1.65
TNNC1P63316 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.73□□□□□ -1.65
TNNC1P63316 RPL18P10-201ENST00000425606 538 ntBASIC4.73□□□□□ -1.65
TNNC1P63316 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.73□□□□□ -1.65
TNNC1P63316 UBE2V1P3-201ENST00000439651 417 ntBASIC4.73□□□□□ -1.65
TNNC1P63316 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.73□□□□□ -1.65
TNNC1P63316 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TNNC1P63316 DHFRP3-201ENST00000455595 559 ntBASIC4.73□□□□□ -1.65
TNNC1P63316 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.73□□□□□ -1.65
TNNC1P63316 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.73□□□□□ -1.65
TNNC1P63316 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.73□□□□□ -1.65
TNNC1P63316 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TNNC1P63316 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.73□□□□□ -1.65
TNNC1P63316 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.73□□□□□ -1.65
TNNC1P63316 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.73□□□□□ -1.65
TNNC1P63316 AF230666.2-201ENST00000602328 725 ntBASIC4.73□□□□□ -1.65
TNNC1P63316 AL160290.3-201ENST00000604869 165 ntBASIC4.73□□□□□ -1.65
TNNC1P63316 AL135786.2-201ENST00000608422 615 ntBASIC4.73□□□□□ -1.65
TNNC1P63316 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.73□□□□□ -1.65
TNNC1P63316 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.73□□□□□ -1.65
TNNC1P63316 AC007546.2-201ENST00000623996 360 ntBASIC4.73□□□□□ -1.65
TNNC1P63316 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TNNC1P63316 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TNNC1P63316 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
TNNC1P63316 KPNA2P2-201ENST00000419546 1489 ntBASIC4.73□□□□□ -1.65
TNNC1P63316 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TNNC1P63316 THAP12P8-201ENST00000447914 2115 ntBASIC4.73□□□□□ -1.65
TNNC1P63316 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TNNC1P63316 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TNNC1P63316 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNNC1P63316 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNNC1P63316 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
TNNC1P63316 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNNC1P63316 RNU4-39P-201ENST00000362455 127 ntBASIC4.72□□□□□ -1.65
TNNC1P63316 RNA5SP307-201ENST00000362863 116 ntBASIC4.72□□□□□ -1.65
TNNC1P63316 RN7SKP224-201ENST00000364140 325 ntBASIC4.72□□□□□ -1.65
TNNC1P63316 MIR93-201ENST00000385024 80 ntBASIC4.72□□□□□ -1.65
TNNC1P63316 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.72□□□□□ -1.65
TNNC1P63316 AL732292.1-201ENST00000426692 226 ntBASIC4.72□□□□□ -1.65
TNNC1P63316 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.72□□□□□ -1.65
TNNC1P63316 PRELID3BP10-201ENST00000431957 584 ntBASIC4.72□□□□□ -1.65
TNNC1P63316 TMX2P1-201ENST00000436507 708 ntBASIC4.72□□□□□ -1.65
TNNC1P63316 AP000936.3-201ENST00000438127 255 ntBASIC4.72□□□□□ -1.65
TNNC1P63316 RPSAP41-201ENST00000439695 860 ntBASIC4.72□□□□□ -1.65
TNNC1P63316 AC114495.1-201ENST00000441274 436 ntBASIC4.72□□□□□ -1.65
TNNC1P63316 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.72□□□□□ -1.65
TNNC1P63316 RN7SL98P-201ENST00000462271 300 ntBASIC4.72□□□□□ -1.65
TNNC1P63316 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.72□□□□□ -1.65
TNNC1P63316 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.72□□□□□ -1.65
TNNC1P63316 AC034205.1-201ENST00000520621 638 ntBASIC4.72□□□□□ -1.65
TNNC1P63316 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.72□□□□□ -1.65
TNNC1P63316 AC068831.4-201ENST00000556118 109 ntBASIC4.72□□□□□ -1.65
TNNC1P63316 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.72□□□□□ -1.65
TNNC1P63316 AC008638.3-201ENST00000603341 463 ntBASIC4.72□□□□□ -1.65
TNNC1P63316 AC079587.1-201ENST00000603846 277 ntBASIC4.72□□□□□ -1.65
TNNC1P63316 Z98200.1-201ENST00000607298 470 ntBASIC4.72□□□□□ -1.65
TNNC1P63316 AL031666.3-201ENST00000609320 1006 ntBASIC4.72□□□□□ -1.65
TNNC1P63316 uc_338.13-201ENST00000618243 179 ntBASIC4.72□□□□□ -1.65
TNNC1P63316 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.72□□□□□ -1.65
TNNC1P63316 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.72□□□□□ -1.65
TNNC1P63316 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TNNC1P63316 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TNNC1P63316 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.72□□□□□ -1.65
TNNC1P63316 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TNNC1P63316 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.72□□□□□ -1.65
TNNC1P63316 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TNNC1P63316 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.72□□□□□ -1.65
TNNC1P63316 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.71□□□□□ -1.65
TNNC1P63316 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
TNNC1P63316 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TNNC1P63316 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.71□□□□□ -1.66
TNNC1P63316 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TNNC1P63316 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 931.9 ms