Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
AP1S1P61966 AL354984.3-201ENST00000604803 325 ntBASIC4.36□□□□□ -1.71
AP1S1P61966 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.36□□□□□ -1.71
AP1S1P61966 AP003497.2-201ENST00000624220 967 ntBASIC4.36□□□□□ -1.71
AP1S1P61966 AC011944.2-201ENST00000624440 683 ntBASIC4.36□□□□□ -1.71
AP1S1P61966 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.36□□□□□ -1.71
AP1S1P61966 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
AP1S1P61966 AL133243.3-201ENST00000617415 3004 ntBASIC4.36□□□□□ -1.71
AP1S1P61966 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
AP1S1P61966 KPNA2P2-201ENST00000419546 1489 ntBASIC4.36□□□□□ -1.71
AP1S1P61966 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.36□□□□□ -1.71
AP1S1P61966 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
AP1S1P61966 AL158163.1-201ENST00000603915 1649 ntBASIC4.35□□□□□ -1.71
AP1S1P61966 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.35□□□□□ -1.71
AP1S1P61966 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S1P61966 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
AP1S1P61966 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.35□□□□□ -1.71
AP1S1P61966 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.35□□□□□ -1.71
AP1S1P61966 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S1P61966 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S1P61966 RNA5SP366-201ENST00000365454 123 ntBASIC4.35□□□□□ -1.71
AP1S1P61966 AL050305.1-201ENST00000399993 1230 ntBASIC4.35□□□□□ -1.71
AP1S1P61966 RPL21P108-201ENST00000413857 481 ntBASIC4.35□□□□□ -1.71
AP1S1P61966 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.35□□□□□ -1.71
AP1S1P61966 GEMIN8P3-201ENST00000445417 720 ntBASIC4.35□□□□□ -1.71
AP1S1P61966 ABCF2P2-201ENST00000450549 296 ntBASIC4.35□□□□□ -1.71
AP1S1P61966 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.35□□□□□ -1.71
AP1S1P61966 RPL23AP81-201ENST00000455252 467 ntBASIC4.35□□□□□ -1.71
AP1S1P61966 RPL7P22-201ENST00000466005 733 ntBASIC4.35□□□□□ -1.71
AP1S1P61966 RN7SL691P-201ENST00000494487 301 ntBASIC4.35□□□□□ -1.71
AP1S1P61966 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.35□□□□□ -1.71
AP1S1P61966 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S1P61966 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.35□□□□□ -1.71
AP1S1P61966 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.35□□□□□ -1.71
AP1S1P61966 AC100770.1-201ENST00000532310 322 ntBASIC4.35□□□□□ -1.71
AP1S1P61966 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.35□□□□□ -1.71
AP1S1P61966 AC006064.5-201ENST00000541782 248 ntBASIC4.35□□□□□ -1.71
AP1S1P61966 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.35□□□□□ -1.71
AP1S1P61966 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S1P61966 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.35□□□□□ -1.71
AP1S1P61966 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S1P61966 AL109766.1-201ENST00000555080 552 ntBASIC4.35□□□□□ -1.71
AP1S1P61966 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.35□□□□□ -1.71
AP1S1P61966 MIR378J-201ENST00000611988 109 ntBASIC4.35□□□□□ -1.71
AP1S1P61966 FAM27D1-201ENST00000612308 341 ntBASIC4.35□□□□□ -1.71
AP1S1P61966 AC019278.1-201ENST00000623516 479 ntBASIC4.35□□□□□ -1.71
AP1S1P61966 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
AP1S1P61966 AC018529.3-201ENST00000624212 2254 ntBASIC4.35□□□□□ -1.71
AP1S1P61966 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S1P61966 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.35□□□□□ -1.71
AP1S1P61966 AC012020.1-201ENST00000624541 1728 ntBASIC4.35□□□□□ -1.71
AP1S1P61966 AC105074.1-201ENST00000623380 3095 ntBASIC4.35□□□□□ -1.71
AP1S1P61966 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
AP1S1P61966 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
AP1S1P61966 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
AP1S1P61966 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
AP1S1P61966 RNU6-178P-201ENST00000384631 104 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 AL583835.1-201ENST00000399570 407 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 RPL23AP48-201ENST00000406913 488 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 AL035696.2-201ENST00000407941 709 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 RNA5SP146-201ENST00000410743 123 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
AP1S1P61966 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 MFSD13B-201ENST00000420133 1290 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 OR2X1P-201ENST00000421144 687 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 PDSS1P1-201ENST00000422953 1114 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 CHIAP3-201ENST00000423668 1133 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 AC073335.1-201ENST00000427776 363 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 AC013410.1-201ENST00000436223 1232 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.34□□□□□ -1.71
AP1S1P61966 AL162388.1-201ENST00000450912 352 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 AC005008.1-201ENST00000456151 612 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 AC109327.1-201ENST00000471666 403 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 RN7SL809P-201ENST00000482040 297 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 AC106806.2-201ENST00000509365 500 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 AC008958.1-201ENST00000511047 682 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.34□□□□□ -1.71
AP1S1P61966 RNA5SP73-201ENST00000516744 108 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 AC008694.2-201ENST00000517591 306 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 PHBP17-201ENST00000528576 541 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.34□□□□□ -1.71
AP1S1P61966 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.34□□□□□ -1.71
AP1S1P61966 AC122134.1-201ENST00000565664 1104 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.34□□□□□ -1.71
AP1S1P61966 AL445423.1-201ENST00000609941 536 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 AC114781.5-201ENST00000615297 108 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
AP1S1P61966 AP000843.1-201ENST00000624880 701 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
AP1S1P61966 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.34□□□□□ -1.71
AP1S1P61966 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.34□□□□□ -1.71
AP1S1P61966 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
AP1S1P61966 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.34□□□□□ -1.71
AP1S1P61966 MTND5P23-201ENST00000430812 1655 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.34□□□□□ -1.71
AP1S1P61966 AC074029.4-201ENST00000624796 1859 ntBASIC4.34□□□□□ -1.71
AP1S1P61966 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
AP1S1P61966 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
AP1S1P61966 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms