Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 RNA5SP360-201ENST00000516555 118 ntBASIC3.42□□□□□ -1.86
CCL3L1P16619 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.42□□□□□ -1.86
CCL3L1P16619 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.42□□□□□ -1.86
CCL3L1P16619 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.42□□□□□ -1.86
CCL3L1P16619 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.42□□□□□ -1.86
CCL3L1P16619 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.42□□□□□ -1.86
CCL3L1P16619 MIR6716-201ENST00000613413 80 ntBASIC3.42□□□□□ -1.86
CCL3L1P16619 TMEM30CP-203ENST00000637814 1035 ntBASIC3.42□□□□□ -1.86
CCL3L1P16619 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.42□□□□□ -1.86
CCL3L1P16619 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CCL3L1P16619 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.42□□□□□ -1.86
CCL3L1P16619 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.42□□□□□ -1.86
CCL3L1P16619 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.42□□□□□ -1.86
CCL3L1P16619 AC116667.1-201ENST00000604855 2072 ntBASIC3.42□□□□□ -1.86
CCL3L1P16619 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCL3L1P16619 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCL3L1P16619 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.41□□□□□ -1.86
CCL3L1P16619 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCL3L1P16619 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCL3L1P16619 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.41□□□□□ -1.86
CCL3L1P16619 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.41□□□□□ -1.86
CCL3L1P16619 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CCL3L1P16619 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CCL3L1P16619 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCL3L1P16619 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCL3L1P16619 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CCL3L1P16619 AC068538.1-201ENST00000376856 336 ntBASIC3.41□□□□□ -1.86
CCL3L1P16619 RNU11-4P-201ENST00000391149 133 ntBASIC3.41□□□□□ -1.86
CCL3L1P16619 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCL3L1P16619 AMZ2P2-201ENST00000406819 1057 ntBASIC3.41□□□□□ -1.86
CCL3L1P16619 AP000357.1-201ENST00000409926 1165 ntBASIC3.41□□□□□ -1.86
CCL3L1P16619 GSTM3P2-201ENST00000412746 530 ntBASIC3.41□□□□□ -1.86
CCL3L1P16619 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.41□□□□□ -1.86
CCL3L1P16619 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.41□□□□□ -1.86
CCL3L1P16619 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC3.41□□□□□ -1.86
CCL3L1P16619 DYNLL1P7-201ENST00000429273 258 ntBASIC3.41□□□□□ -1.86
CCL3L1P16619 AC006011.1-201ENST00000442758 349 ntBASIC3.41□□□□□ -1.86
CCL3L1P16619 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.41□□□□□ -1.86
CCL3L1P16619 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.41□□□□□ -1.86
CCL3L1P16619 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
CCL3L1P16619 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCL3L1P16619 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCL3L1P16619 IFITM8P-201ENST00000522529 394 ntBASIC3.41□□□□□ -1.86
CCL3L1P16619 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.41□□□□□ -1.86
CCL3L1P16619 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.41□□□□□ -1.86
CCL3L1P16619 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CCL3L1P16619 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC3.41□□□□□ -1.86
CCL3L1P16619 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.41□□□□□ -1.86
CCL3L1P16619 MIR4675-201ENST00000577898 77 ntBASIC3.41□□□□□ -1.86
CCL3L1P16619 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.41□□□□□ -1.86
CCL3L1P16619 AL139041.1-201ENST00000605480 610 ntBASIC3.41□□□□□ -1.86
CCL3L1P16619 MIR432-201ENST00000606207 94 ntBASIC3.41□□□□□ -1.86
CCL3L1P16619 AC090246.1-201ENST00000616499 426 ntBASIC3.41□□□□□ -1.86
CCL3L1P16619 AL023881.1-201ENST00000621088 301 ntBASIC3.41□□□□□ -1.86
CCL3L1P16619 MIR7702-201ENST00000621931 59 ntBASIC3.41□□□□□ -1.86
CCL3L1P16619 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CCL3L1P16619 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCL3L1P16619 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CCL3L1P16619 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
CCL3L1P16619 AC116158.1-201ENST00000560231 2129 ntBASIC3.4□□□□□ -1.86
CCL3L1P16619 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.4□□□□□ -1.86
CCL3L1P16619 AC087190.4-201ENST00000574616 8334 ntBASIC3.4□□□□□ -1.86
CCL3L1P16619 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CCL3L1P16619 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCL3L1P16619 AL121657.1-201ENST00000327215 531 ntBASIC3.4□□□□□ -1.87
CCL3L1P16619 RNU1-108P-201ENST00000362556 161 ntBASIC3.4□□□□□ -1.87
CCL3L1P16619 RNU1-94P-201ENST00000362627 173 ntBASIC3.4□□□□□ -1.87
CCL3L1P16619 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCL3L1P16619 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCL3L1P16619 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCL3L1P16619 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCL3L1P16619 GNG5P5-201ENST00000420444 220 ntBASIC3.4□□□□□ -1.87
CCL3L1P16619 COX6CP15-201ENST00000426313 211 ntBASIC3.4□□□□□ -1.87
CCL3L1P16619 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC3.4□□□□□ -1.87
CCL3L1P16619 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.4□□□□□ -1.87
CCL3L1P16619 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.4□□□□□ -1.87
CCL3L1P16619 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.4□□□□□ -1.87
CCL3L1P16619 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.4□□□□□ -1.87
CCL3L1P16619 FCF1P7-201ENST00000451185 558 ntBASIC3.4□□□□□ -1.87
CCL3L1P16619 RNA5SP246-201ENST00000458909 119 ntBASIC3.4□□□□□ -1.87
CCL3L1P16619 RN7SL604P-201ENST00000492589 296 ntBASIC3.4□□□□□ -1.87
CCL3L1P16619 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.4□□□□□ -1.87
CCL3L1P16619 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.4□□□□□ -1.87
CCL3L1P16619 HPRT1P2-201ENST00000505250 544 ntBASIC3.4□□□□□ -1.87
CCL3L1P16619 KRT19P6-201ENST00000510983 209 ntBASIC3.4□□□□□ -1.87
CCL3L1P16619 NPM1P6-201ENST00000521088 871 ntBASIC3.4□□□□□ -1.87
CCL3L1P16619 OR7E10P-201ENST00000526420 991 ntBASIC3.4□□□□□ -1.87
CCL3L1P16619 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCL3L1P16619 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.4□□□□□ -1.87
CCL3L1P16619 RPL23AP87-202ENST00000573039 466 ntBASIC3.4□□□□□ -1.87
CCL3L1P16619 RN7SL600P-201ENST00000581811 299 ntBASIC3.4□□□□□ -1.87
CCL3L1P16619 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.4□□□□□ -1.87
CCL3L1P16619 AC006116.5-201ENST00000591936 559 ntBASIC3.4□□□□□ -1.87
CCL3L1P16619 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCL3L1P16619 AL451044.1-201ENST00000604867 238 ntBASIC3.4□□□□□ -1.87
CCL3L1P16619 AL590392.1-201ENST00000604960 446 ntBASIC3.4□□□□□ -1.87
CCL3L1P16619 AC015922.4-201ENST00000612568 690 ntBASIC3.4□□□□□ -1.87
CCL3L1P16619 MIR6810-201ENST00000622701 70 ntBASIC3.4□□□□□ -1.87
CCL3L1P16619 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.4□□□□□ -1.87
CCL3L1P16619 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms