Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.95□□□□□ -1.78
SPTA1P02549 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SPTA1P02549 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SPTA1P02549 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SPTA1P02549 AC023632.6-201ENST00000624338 2177 ntBASIC3.95□□□□□ -1.78
SPTA1P02549 MAPK10-338ENST00000641647 3362 ntBASIC3.94□□□□□ -1.78
SPTA1P02549 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC3.94□□□□□ -1.78
SPTA1P02549 RNU6-301P-201ENST00000384277 107 ntBASIC3.94□□□□□ -1.78
SPTA1P02549 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SPTA1P02549 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.94□□□□□ -1.78
SPTA1P02549 RPL23AP53-201ENST00000521854 457 ntBASIC3.94□□□□□ -1.78
SPTA1P02549 AC012314.7-201ENST00000619693 93 ntBASIC3.94□□□□□ -1.78
SPTA1P02549 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.94□□□□□ -1.78
SPTA1P02549 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.94□□□□□ -1.78
SPTA1P02549 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
SPTA1P02549 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SPTA1P02549 AC022417.1-201ENST00000624768 1303 ntBASIC3.94□□□□□ -1.78
SPTA1P02549 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SPTA1P02549 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SPTA1P02549 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SPTA1P02549 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SPTA1P02549 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SPTA1P02549 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.94□□□□□ -1.78
SPTA1P02549 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SPTA1P02549 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC3.94□□□□□ -1.78
SPTA1P02549 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.94□□□□□ -1.78
SPTA1P02549 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC3.94□□□□□ -1.78
SPTA1P02549 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC3.94□□□□□ -1.78
SPTA1P02549 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SPTA1P02549 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC3.94□□□□□ -1.78
SPTA1P02549 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC3.94□□□□□ -1.78
SPTA1P02549 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.94□□□□□ -1.78
SPTA1P02549 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.94□□□□□ -1.78
SPTA1P02549 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SPTA1P02549 AC079587.1-201ENST00000603846 277 ntBASIC3.94□□□□□ -1.78
SPTA1P02549 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.94□□□□□ -1.78
SPTA1P02549 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
SPTA1P02549 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SPTA1P02549 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC3.93□□□□□ -1.78
SPTA1P02549 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SPTA1P02549 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SPTA1P02549 MIR183-201ENST00000384958 110 ntBASIC3.93□□□□□ -1.78
SPTA1P02549 AL035079.1-201ENST00000405210 287 ntBASIC3.93□□□□□ -1.78
SPTA1P02549 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC3.93□□□□□ -1.78
SPTA1P02549 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.93□□□□□ -1.78
SPTA1P02549 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.93□□□□□ -1.78
SPTA1P02549 BX276092.6-201ENST00000430476 250 ntBASIC3.93□□□□□ -1.78
SPTA1P02549 BX276092.8-201ENST00000455722 250 ntBASIC3.93□□□□□ -1.78
SPTA1P02549 RPL21P8-201ENST00000465083 535 ntBASIC3.93□□□□□ -1.78
SPTA1P02549 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC3.93□□□□□ -1.78
SPTA1P02549 AC090912.3-201ENST00000609775 533 ntBASIC3.93□□□□□ -1.78
SPTA1P02549 AC135507.2-201ENST00000612443 309 ntBASIC3.93□□□□□ -1.78
SPTA1P02549 AC068722.2-201ENST00000618734 544 ntBASIC3.93□□□□□ -1.78
SPTA1P02549 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.93□□□□□ -1.78
SPTA1P02549 AC006065.6-201ENST00000625201 545 ntBASIC3.93□□□□□ -1.78
SPTA1P02549 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
SPTA1P02549 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SPTA1P02549 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SPTA1P02549 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SPTA1P02549 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SPTA1P02549 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SPTA1P02549 OR4A15-201ENST00000314706 1035 ntBASIC3.93□□□□□ -1.78
SPTA1P02549 E2F6P2-201ENST00000420708 748 ntBASIC3.93□□□□□ -1.78
SPTA1P02549 AL512649.1-201ENST00000428997 581 ntBASIC3.93□□□□□ -1.78
SPTA1P02549 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.93□□□□□ -1.78
SPTA1P02549 RPS27AP17-201ENST00000463344 455 ntBASIC3.93□□□□□ -1.78
SPTA1P02549 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC3.93□□□□□ -1.78
SPTA1P02549 AC022336.1-201ENST00000475510 337 ntBASIC3.93□□□□□ -1.78
SPTA1P02549 TRAV8-5-201ENST00000537369 341 ntBASIC3.93□□□□□ -1.78
SPTA1P02549 AC025857.2-201ENST00000602711 238 ntBASIC3.93□□□□□ -1.78
SPTA1P02549 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.93□□□□□ -1.78
SPTA1P02549 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.93□□□□□ -1.78
SPTA1P02549 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SPTA1P02549 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SPTA1P02549 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.93□□□□□ -1.78
SPTA1P02549 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.93□□□□□ -1.78
SPTA1P02549 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SPTA1P02549 ZFRP1-201ENST00000457579 2970 ntBASIC3.92□□□□□ -1.78
SPTA1P02549 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SPTA1P02549 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SPTA1P02549 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SPTA1P02549 RNU1-132P-201ENST00000364300 164 ntBASIC3.92□□□□□ -1.78
SPTA1P02549 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.92□□□□□ -1.78
SPTA1P02549 TBCAP1-201ENST00000436520 327 ntBASIC3.92□□□□□ -1.78
SPTA1P02549 AL358832.1-201ENST00000497800 389 ntBASIC3.92□□□□□ -1.78
SPTA1P02549 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.92□□□□□ -1.78
SPTA1P02549 Y_RNA.673-201ENST00000516306 88 ntBASIC3.92□□□□□ -1.78
SPTA1P02549 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.92□□□□□ -1.78
SPTA1P02549 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.92□□□□□ -1.78
SPTA1P02549 Z95327.3-201ENST00000610385 572 ntBASIC3.92□□□□□ -1.78
SPTA1P02549 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.92□□□□□ -1.78
SPTA1P02549 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC3.92□□□□□ -1.78
SPTA1P02549 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SPTA1P02549 SNORA70.6-201ENST00000383934 134 ntBASIC3.92□□□□□ -1.78
SPTA1P02549 RN7SKP156-201ENST00000410308 342 ntBASIC3.92□□□□□ -1.78
SPTA1P02549 PPIAP13-201ENST00000434706 478 ntBASIC3.92□□□□□ -1.78
SPTA1P02549 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.92□□□□□ -1.78
SPTA1P02549 PDSS1P2-201ENST00000449397 678 ntBASIC3.92□□□□□ -1.78
SPTA1P02549 RN7SL197P-201ENST00000466981 299 ntBASIC3.92□□□□□ -1.78
SPTA1P02549 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms