Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL20A1Q9P218 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL20A1Q9P218 AP001029.2-203ENST00000589795 4910 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL20A1Q9P218 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 AC093311.1-201ENST00000506586 2021 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL20A1Q9P218 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 RNU4-68P-201ENST00000364314 141 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL20A1Q9P218 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 MTCO1P56-201ENST00000401674 224 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 RN7SKP97-201ENST00000410966 333 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 BTF3P8-201ENST00000414577 526 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 AL807761.1-201ENST00000417622 171 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 MTCO2P21-201ENST00000419780 677 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 HMGB3P6-201ENST00000444896 598 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 AC004980.3-201ENST00000447046 365 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 OR52E3P-201ENST00000452083 936 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 PTGES3P5-201ENST00000455109 434 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL20A1Q9P218 RPL23AP37-201ENST00000479658 549 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 AC010627.1-201ENST00000503819 1294 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 HPRT1P2-201ENST00000505250 544 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 AC008565.1-201ENST00000509046 885 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL20A1Q9P218 PRELID3BP4-201ENST00000515476 571 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 IGKV2D-10-201ENST00000520194 281 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 CR383656.6-201ENST00000550518 394 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 AL137100.1-201ENST00000556703 1620 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 TVP23CP2-201ENST00000571473 623 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 NIFKP6-201ENST00000598115 845 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 AC068790.7-201ENST00000602347 528 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 ELOCP35-201ENST00000604289 336 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 AL161616.1-201ENST00000611867 286 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL20A1Q9P218 AC010975.3-201ENST00000618727 978 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 AC091932.2-201ENST00000623014 291 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 AP000550.3-201ENST00000637734 379 ntBASIC5.61□□□□□ -1.51
COL20A1Q9P218 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL20A1Q9P218 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL20A1Q9P218 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
COL20A1Q9P218 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 SDAD1P1-202ENST00000524156 2051 ntBASIC5.6□□□□□ -1.51
COL20A1Q9P218 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL20A1Q9P218 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL20A1Q9P218 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL20A1Q9P218 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 AP005435.3-201ENST00000531260 3198 ntBASIC5.6□□□□□ -1.51
COL20A1Q9P218 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL20A1Q9P218 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL20A1Q9P218 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 RNA5SP505-201ENST00000364748 108 ntBASIC5.6□□□□□ -1.51
COL20A1Q9P218 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL20A1Q9P218 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL20A1Q9P218 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 SNORD116-12-201ENST00000384468 92 ntBASIC5.6□□□□□ -1.51
COL20A1Q9P218 RNU6-225P-201ENST00000384613 103 ntBASIC5.6□□□□□ -1.51
COL20A1Q9P218 MIR525-201ENST00000384978 85 ntBASIC5.6□□□□□ -1.51
COL20A1Q9P218 MCTS2P-201ENST00000394552 546 ntBASIC5.6□□□□□ -1.51
COL20A1Q9P218 AC013442.1-201ENST00000397347 228 ntBASIC5.6□□□□□ -1.51
COL20A1Q9P218 GTF2IP2-201ENST00000424290 697 ntBASIC5.6□□□□□ -1.51
COL20A1Q9P218 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 ARL5AP2-201ENST00000444698 533 ntBASIC5.6□□□□□ -1.51
COL20A1Q9P218 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 CDC42P1-201ENST00000456658 548 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms