Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 AC122134.1-201ENST00000565664 1104 ntBASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 MTCYBP28-201ENST00000566728 1132 ntBASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 VN1R82P-201ENST00000601481 356 ntBASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 IMMP1LP3-201ENST00000604197 224 ntBASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 AC124312.4-201ENST00000605533 310 ntBASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 AC069545.1-201ENST00000605671 358 ntBASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 AC023509.5-201ENST00000617434 807 ntBASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 MIR6826-201ENST00000617808 98 ntBASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 AC073530.2-201ENST00000623987 261 ntBASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 AC092608.3-201ENST00000625017 386 ntBASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 SAMMSON-209ENST00000641222 1100 ntBASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTHRC1Q96CG8 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 RARSP1-201ENST00000542842 1418 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 RNA5SP241-201ENST00000391326 114 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 ADAM24P-201ENST00000398655 2101 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 SETP15-201ENST00000412724 337 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AL139421.1-201ENST00000423010 169 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AL593851.1-201ENST00000426171 157 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 CFL1P1-202ENST00000432948 411 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 RPL21P110-201ENST00000433345 446 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 ATP5F1P1-201ENST00000433775 569 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AC118469.1-201ENST00000442943 488 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 RPL21P134-201ENST00000453468 483 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 BZW1P2-201ENST00000473537 826 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 RPL15P21-201ENST00000495592 567 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 RNU6-416P-201ENST00000516265 103 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 RNU6-232P-201ENST00000517144 64 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 RNA5SP373-201ENST00000517271 95 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 OR8A2P-201ENST00000528631 952 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AC090312.2-201ENST00000582687 378 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AC090616.2-202ENST00000584248 222 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AC009027.1-201ENST00000604510 479 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AL163642.2-201ENST00000604722 1019 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AC122133.1-201ENST00000613964 233 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 MIR7973-1-201ENST00000614683 76 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AC005840.5-201ENST00000619166 599 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 MIR4278-201ENST00000636094 69 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AC073869.7-201ENST00000640874 297 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 AC046144.1-201ENST00000478559 1853 ntBASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CTHRC1Q96CG8 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 SGO1P1-201ENST00000603525 1447 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms