Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 HSPD1P11-201ENST00000508643 1702 ntBASIC6.21□□□□□ -1.42
MRE11P49959 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
MRE11P49959 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.21□□□□□ -1.42
MRE11P49959 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MRE11P49959 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MRE11P49959 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MRE11P49959 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MRE11P49959 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
MRE11P49959 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
MRE11P49959 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
MRE11P49959 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.2□□□□□ -1.42
MRE11P49959 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
MRE11P49959 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
MRE11P49959 AC097461.1-201ENST00000568928 2821 ntBASIC6.2□□□□□ -1.42
MRE11P49959 AC093536.2-201ENST00000565257 1406 ntBASIC6.2□□□□□ -1.42
MRE11P49959 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MRE11P49959 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.2□□□□□ -1.42
MRE11P49959 Y_RNA.201-201ENST00000364052 96 ntBASIC6.2□□□□□ -1.42
MRE11P49959 RNU4-24P-201ENST00000364565 139 ntBASIC6.2□□□□□ -1.42
MRE11P49959 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
MRE11P49959 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.2□□□□□ -1.42
MRE11P49959 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.2□□□□□ -1.42
MRE11P49959 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
MRE11P49959 AL136310.1-201ENST00000404926 654 ntBASIC6.2□□□□□ -1.42
MRE11P49959 ATF1P1-201ENST00000406040 927 ntBASIC6.2□□□□□ -1.42
MRE11P49959 FCF1P5-201ENST00000406490 482 ntBASIC6.2□□□□□ -1.42
MRE11P49959 AL357752.1-201ENST00000412817 349 ntBASIC6.2□□□□□ -1.42
MRE11P49959 BMS1P17-202ENST00000416720 316 ntBASIC6.2□□□□□ -1.42
MRE11P49959 GLUD1P9-201ENST00000420997 1173 ntBASIC6.2□□□□□ -1.42
MRE11P49959 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MRE11P49959 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC6.2□□□□□ -1.42
MRE11P49959 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.2□□□□□ -1.42
MRE11P49959 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.2□□□□□ -1.42
MRE11P49959 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC6.2□□□□□ -1.42
MRE11P49959 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.2□□□□□ -1.42
MRE11P49959 CCRL1P1-201ENST00000449542 1053 ntBASIC6.2□□□□□ -1.42
MRE11P49959 AC073387.1-201ENST00000453261 709 ntBASIC6.2□□□□□ -1.42
MRE11P49959 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.2□□□□□ -1.42
MRE11P49959 AC091180.1-201ENST00000462104 372 ntBASIC6.2□□□□□ -1.42
MRE11P49959 RN7SL604P-201ENST00000492589 296 ntBASIC6.2□□□□□ -1.42
MRE11P49959 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.2□□□□□ -1.42
MRE11P49959 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC6.2□□□□□ -1.42
MRE11P49959 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.2□□□□□ -1.42
MRE11P49959 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.2□□□□□ -1.42
MRE11P49959 MTND2P26-201ENST00000528255 1029 ntBASIC6.2□□□□□ -1.42
MRE11P49959 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.2□□□□□ -1.42
MRE11P49959 OR8I1P-201ENST00000529291 931 ntBASIC6.2□□□□□ -1.42
MRE11P49959 AP000676.2-201ENST00000529711 301 ntBASIC6.2□□□□□ -1.42
MRE11P49959 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC6.2□□□□□ -1.42
MRE11P49959 OR11H3P-201ENST00000554547 982 ntBASIC6.2□□□□□ -1.42
MRE11P49959 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
MRE11P49959 TVP23CP2-201ENST00000571473 623 ntBASIC6.2□□□□□ -1.42
MRE11P49959 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MRE11P49959 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.2□□□□□ -1.42
MRE11P49959 VIS1.1-201ENST00000610517 203 ntBASIC6.2□□□□□ -1.42
MRE11P49959 TUSC7.1-201ENST00000610969 165 ntBASIC6.2□□□□□ -1.42
MRE11P49959 AC090607.5-201ENST00000615692 224 ntBASIC6.2□□□□□ -1.42
MRE11P49959 AL121895.2-201ENST00000619558 447 ntBASIC6.2□□□□□ -1.42
MRE11P49959 MIR6837-201ENST00000620884 64 ntBASIC6.2□□□□□ -1.42
MRE11P49959 AC135068.5-201ENST00000624197 983 ntBASIC6.2□□□□□ -1.42
MRE11P49959 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
MRE11P49959 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.2□□□□□ -1.42
MRE11P49959 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
MRE11P49959 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.2□□□□□ -1.42
MRE11P49959 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
MRE11P49959 AC079298.1-201ENST00000625026 1619 ntBASIC6.2□□□□□ -1.42
MRE11P49959 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.2□□□□□ -1.42
MRE11P49959 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
MRE11P49959 AC021242.1-201ENST00000507315 2035 ntBASIC6.2□□□□□ -1.42
MRE11P49959 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
MRE11P49959 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC6.19□□□□□ -1.42
MRE11P49959 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.19□□□□□ -1.42
MRE11P49959 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.19□□□□□ -1.42
MRE11P49959 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MRE11P49959 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MRE11P49959 OR9G4-201ENST00000302957 984 ntBASIC6.19□□□□□ -1.42
MRE11P49959 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
MRE11P49959 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MRE11P49959 RNU6-623P-201ENST00000363143 105 ntBASIC6.19□□□□□ -1.42
MRE11P49959 RNU4-92P-201ENST00000363783 136 ntBASIC6.19□□□□□ -1.42
MRE11P49959 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MRE11P49959 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.19□□□□□ -1.42
MRE11P49959 AC016739.1-201ENST00000405359 345 ntBASIC6.19□□□□□ -1.42
MRE11P49959 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.19□□□□□ -1.42
MRE11P49959 BTF3L4P1-201ENST00000413813 468 ntBASIC6.19□□□□□ -1.42
MRE11P49959 USP9YP26-201ENST00000421008 661 ntBASIC6.19□□□□□ -1.42
MRE11P49959 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.19□□□□□ -1.42
MRE11P49959 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC6.19□□□□□ -1.42
MRE11P49959 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.19□□□□□ -1.42
MRE11P49959 ARL4AP3-201ENST00000441452 574 ntBASIC6.19□□□□□ -1.42
MRE11P49959 AC118469.1-201ENST00000442943 488 ntBASIC6.19□□□□□ -1.42
MRE11P49959 ELOCP30-201ENST00000447108 299 ntBASIC6.19□□□□□ -1.42
MRE11P49959 AC239367.2-201ENST00000447309 705 ntBASIC6.19□□□□□ -1.42
MRE11P49959 RPS6P2-201ENST00000454208 705 ntBASIC6.19□□□□□ -1.42
MRE11P49959 AC005410.1-202ENST00000460347 485 ntBASIC6.19□□□□□ -1.42
MRE11P49959 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.19□□□□□ -1.42
MRE11P49959 RPS4XP6-201ENST00000477670 797 ntBASIC6.19□□□□□ -1.42
MRE11P49959 RN7SL481P-201ENST00000477764 299 ntBASIC6.19□□□□□ -1.42
MRE11P49959 AC092865.4-201ENST00000477936 615 ntBASIC6.19□□□□□ -1.42
MRE11P49959 AC079841.1-201ENST00000481228 950 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms