Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.72□□□□□ -1.65
SOX2P48431 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.72□□□□□ -1.65
SOX2P48431 AC084824.1-201ENST00000550917 1005 ntBASIC4.72□□□□□ -1.65
SOX2P48431 HIGD1AP17-201ENST00000554576 276 ntBASIC4.72□□□□□ -1.65
SOX2P48431 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.72□□□□□ -1.65
SOX2P48431 AC135628.1-201ENST00000568867 534 ntBASIC4.72□□□□□ -1.65
SOX2P48431 AC092121.1-201ENST00000569452 202 ntBASIC4.72□□□□□ -1.65
SOX2P48431 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.72□□□□□ -1.65
SOX2P48431 AP005136.1-201ENST00000579765 429 ntBASIC4.72□□□□□ -1.65
SOX2P48431 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.72□□□□□ -1.65
SOX2P48431 VN1R82P-201ENST00000601481 356 ntBASIC4.72□□□□□ -1.65
SOX2P48431 AC009027.1-201ENST00000604510 479 ntBASIC4.72□□□□□ -1.65
SOX2P48431 AC100767.2-201ENST00000604840 693 ntBASIC4.72□□□□□ -1.65
SOX2P48431 AC124312.4-201ENST00000605533 310 ntBASIC4.72□□□□□ -1.65
SOX2P48431 uc_338.9-201ENST00000617424 182 ntBASIC4.72□□□□□ -1.65
SOX2P48431 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.72□□□□□ -1.65
SOX2P48431 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.72□□□□□ -1.65
SOX2P48431 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.72□□□□□ -1.65
SOX2P48431 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.72□□□□□ -1.65
SOX2P48431 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
SOX2P48431 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SOX2P48431 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
SOX2P48431 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SOX2P48431 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SOX2P48431 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
SOX2P48431 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
SOX2P48431 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.72□□□□□ -1.65
SOX2P48431 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.72□□□□□ -1.65
SOX2P48431 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.72□□□□□ -1.65
SOX2P48431 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SOX2P48431 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.72□□□□□ -1.65
SOX2P48431 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SOX2P48431 RBPJP2-201ENST00000618187 1444 ntBASIC4.72□□□□□ -1.65
SOX2P48431 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.71□□□□□ -1.65
SOX2P48431 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.65
SOX2P48431 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.71□□□□□ -1.65
SOX2P48431 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
SOX2P48431 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SOX2P48431 AL355852.1-201ENST00000454081 1771 ntBASIC4.71□□□□□ -1.66
SOX2P48431 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SOX2P48431 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SOX2P48431 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SOX2P48431 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SOX2P48431 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.71□□□□□ -1.66
SOX2P48431 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SOX2P48431 AC005539.1-201ENST00000443768 1479 ntBASIC4.71□□□□□ -1.66
SOX2P48431 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SOX2P48431 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SOX2P48431 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SOX2P48431 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SOX2P48431 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SOX2P48431 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.71□□□□□ -1.66
SOX2P48431 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SOX2P48431 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SOX2P48431 RNU6-317P-201ENST00000384031 107 ntBASIC4.71□□□□□ -1.66
SOX2P48431 SNORA48.4-201ENST00000391089 134 ntBASIC4.71□□□□□ -1.66
SOX2P48431 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.71□□□□□ -1.66
SOX2P48431 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.71□□□□□ -1.66
SOX2P48431 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.71□□□□□ -1.66
SOX2P48431 MRPS36P1-201ENST00000421291 307 ntBASIC4.71□□□□□ -1.66
SOX2P48431 AC004074.1-201ENST00000421810 1063 ntBASIC4.71□□□□□ -1.66
SOX2P48431 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.71□□□□□ -1.66
SOX2P48431 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.71□□□□□ -1.66
SOX2P48431 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.71□□□□□ -1.66
SOX2P48431 MTCO3P5-201ENST00000433620 714 ntBASIC4.71□□□□□ -1.66
SOX2P48431 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.71□□□□□ -1.66
SOX2P48431 RPL23AP19-201ENST00000436229 369 ntBASIC4.71□□□□□ -1.66
SOX2P48431 THAP5P1-201ENST00000439089 262 ntBASIC4.71□□□□□ -1.66
SOX2P48431 UBE2V1P5-201ENST00000440070 405 ntBASIC4.71□□□□□ -1.66
SOX2P48431 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.71□□□□□ -1.66
SOX2P48431 RPS7P5-201ENST00000441482 581 ntBASIC4.71□□□□□ -1.66
SOX2P48431 EEF1B2P5-201ENST00000444820 548 ntBASIC4.71□□□□□ -1.66
SOX2P48431 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.71□□□□□ -1.66
SOX2P48431 AL035551.1-201ENST00000446931 348 ntBASIC4.71□□□□□ -1.66
SOX2P48431 MTCO2P25-201ENST00000447065 681 ntBASIC4.71□□□□□ -1.66
SOX2P48431 NPM1P19-201ENST00000450070 712 ntBASIC4.71□□□□□ -1.66
SOX2P48431 VDAC2P4-201ENST00000452925 711 ntBASIC4.71□□□□□ -1.66
SOX2P48431 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.71□□□□□ -1.66
SOX2P48431 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SOX2P48431 AC092754.1-201ENST00000472975 479 ntBASIC4.71□□□□□ -1.66
SOX2P48431 MTND3P7-201ENST00000474435 343 ntBASIC4.71□□□□□ -1.66
SOX2P48431 VPS26AP1-201ENST00000483197 979 ntBASIC4.71□□□□□ -1.66
SOX2P48431 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.71□□□□□ -1.66
SOX2P48431 NIFKP7-201ENST00000503365 834 ntBASIC4.71□□□□□ -1.66
SOX2P48431 AC073358.1-201ENST00000505671 684 ntBASIC4.71□□□□□ -1.66
SOX2P48431 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.71□□□□□ -1.66
SOX2P48431 IGBP1P5-201ENST00000507524 1000 ntBASIC4.71□□□□□ -1.66
SOX2P48431 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.71□□□□□ -1.66
SOX2P48431 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.71□□□□□ -1.66
SOX2P48431 AC117532.1-201ENST00000514638 323 ntBASIC4.71□□□□□ -1.66
SOX2P48431 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.71□□□□□ -1.66
SOX2P48431 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.71□□□□□ -1.66
SOX2P48431 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.71□□□□□ -1.66
SOX2P48431 AC100784.1-201ENST00000522790 310 ntBASIC4.71□□□□□ -1.66
SOX2P48431 MTCO1P49-201ENST00000523429 802 ntBASIC4.71□□□□□ -1.66
SOX2P48431 AP000648.1-201ENST00000529682 397 ntBASIC4.71□□□□□ -1.66
SOX2P48431 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SOX2P48431 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.71□□□□□ -1.66
SOX2P48431 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.71□□□□□ -1.66
SOX2P48431 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms