Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.79□□□□□ -1.48
COL6A2P12110 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL6A2P12110 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.79□□□□□ -1.48
COL6A2P12110 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL6A2P12110 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL6A2P12110 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL6A2P12110 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL6A2P12110 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL6A2P12110 MAPK10-328ENST00000641553 4009 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL6A2P12110 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.78□□□□□ -1.48
COL6A2P12110 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
COL6A2P12110 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL6A2P12110 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL6A2P12110 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL6A2P12110 RNU6-1066P-201ENST00000363573 105 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 RN7SKP171-201ENST00000364417 303 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL6A2P12110 RNU6-729P-201ENST00000384399 107 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.78□□□□□ -1.48
COL6A2P12110 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.78□□□□□ -1.48
COL6A2P12110 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.78□□□□□ -1.48
COL6A2P12110 RPL21P108-201ENST00000413857 481 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.78□□□□□ -1.48
COL6A2P12110 AC007559.1-201ENST00000428736 355 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 AC138761.5-201ENST00000433967 325 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 AC023141.8-201ENST00000442554 208 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 BMS1P10-201ENST00000443754 1120 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.78□□□□□ -1.48
COL6A2P12110 AC007383.1-201ENST00000445875 636 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.78□□□□□ -1.48
COL6A2P12110 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.78□□□□□ -1.48
COL6A2P12110 SSXP1-201ENST00000453640 473 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.78□□□□□ -1.48
COL6A2P12110 AC004129.2-201ENST00000457229 287 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 TPT1P7-201ENST00000458300 517 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.78□□□□□ -1.48
COL6A2P12110 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.78□□□□□ -1.48
COL6A2P12110 RPL37P25-201ENST00000507308 276 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
COL6A2P12110 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 TCP11X3P-202ENST00000514289 1254 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 GAPDHP62-201ENST00000515313 990 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.78□□□□□ -1.48
COL6A2P12110 AP003033.2-201ENST00000528901 805 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL6A2P12110 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.78□□□□□ -1.48
COL6A2P12110 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL6A2P12110 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.78□□□□□ -1.48
COL6A2P12110 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.78□□□□□ -1.48
COL6A2P12110 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.78□□□□□ -1.48
COL6A2P12110 MRPS21P8-201ENST00000569196 235 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 MTND1P15-201ENST00000579262 949 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.78□□□□□ -1.48
COL6A2P12110 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL6A2P12110 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.78□□□□□ -1.48
COL6A2P12110 AC011500.1-201ENST00000601963 469 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 AC091805.2-201ENST00000603848 235 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 AC067959.1-201ENST00000604334 379 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 AC024560.3-201ENST00000608482 349 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.78□□□□□ -1.48
COL6A2P12110 AL135999.3-201ENST00000610501 812 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 AC005332.6-201ENST00000613178 446 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.78□□□□□ -1.48
COL6A2P12110 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.78□□□□□ -1.48
COL6A2P12110 DDX18P4-201ENST00000511690 1966 ntBASIC5.78□□□□□ -1.48
COL6A2P12110 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
COL6A2P12110 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL6A2P12110 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL6A2P12110 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.78□□□□□ -1.48
COL6A2P12110 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
COL6A2P12110 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL6A2P12110 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL6A2P12110 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
COL6A2P12110 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL6A2P12110 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL6A2P12110 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
COL6A2P12110 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
COL6A2P12110 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
COL6A2P12110 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.77□□□□□ -1.49
COL6A2P12110 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
COL6A2P12110 ANKRD36BP1-202ENST00000604892 1417 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL6A2P12110 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
COL6A2P12110 SELENOWP1-201ENST00000322792 252 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 Y_RNA.302-201ENST00000364997 102 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
COL6A2P12110 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC5.77□□□□□ -1.49
COL6A2P12110 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.77□□□□□ -1.49
COL6A2P12110 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
COL6A2P12110 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL6A2P12110 AC016739.1-201ENST00000405359 345 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 RNU2-66P-201ENST00000410650 161 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 AL035422.1-201ENST00000414193 397 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.77□□□□□ -1.49
COL6A2P12110 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.77□□□□□ -1.49
COL6A2P12110 EIF1P1-201ENST00000421436 341 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 AC004448.2-201ENST00000422360 586 ntBASIC5.77□□□□□ -1.49
COL6A2P12110 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms