Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 HSPD1P14-201ENST00000432666 1618 ntBASIC5.24□□□□□ -1.57
MMP3P08254 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.24□□□□□ -1.57
MMP3P08254 SNORA71.2-201ENST00000364941 134 ntBASIC5.24□□□□□ -1.57
MMP3P08254 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
MMP3P08254 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
MMP3P08254 RNU6-354P-201ENST00000383862 107 ntBASIC5.24□□□□□ -1.57
MMP3P08254 RNU6-610P-201ENST00000384264 107 ntBASIC5.24□□□□□ -1.57
MMP3P08254 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.24□□□□□ -1.57
MMP3P08254 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.24□□□□□ -1.57
MMP3P08254 AC079809.1-201ENST00000415468 276 ntBASIC5.24□□□□□ -1.57
MMP3P08254 AC234779.1-201ENST00000425910 285 ntBASIC5.24□□□□□ -1.57
MMP3P08254 AL356981.1-201ENST00000454879 684 ntBASIC5.24□□□□□ -1.57
MMP3P08254 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.24□□□□□ -1.57
MMP3P08254 RPL21P18-201ENST00000469899 480 ntBASIC5.24□□□□□ -1.57
MMP3P08254 NIP7P2-201ENST00000485801 544 ntBASIC5.24□□□□□ -1.57
MMP3P08254 MYL12BP2-201ENST00000503948 512 ntBASIC5.24□□□□□ -1.57
MMP3P08254 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.24□□□□□ -1.57
MMP3P08254 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.24□□□□□ -1.57
MMP3P08254 AC105031.1-201ENST00000518550 476 ntBASIC5.24□□□□□ -1.57
MMP3P08254 RPL23AP53-201ENST00000521854 457 ntBASIC5.24□□□□□ -1.57
MMP3P08254 CIR1P1-201ENST00000524055 1133 ntBASIC5.24□□□□□ -1.57
MMP3P08254 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.24□□□□□ -1.57
MMP3P08254 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.24□□□□□ -1.57
MMP3P08254 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.24□□□□□ -1.57
MMP3P08254 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.24□□□□□ -1.57
MMP3P08254 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.24□□□□□ -1.57
MMP3P08254 CBX3P2-202ENST00000583365 535 ntBASIC5.24□□□□□ -1.57
MMP3P08254 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.24□□□□□ -1.57
MMP3P08254 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.24□□□□□ -1.57
MMP3P08254 AL020997.2-201ENST00000602607 184 ntBASIC5.24□□□□□ -1.57
MMP3P08254 AC002069.2-201ENST00000603580 883 ntBASIC5.24□□□□□ -1.57
MMP3P08254 AC069431.2-201ENST00000604149 1099 ntBASIC5.24□□□□□ -1.57
MMP3P08254 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.24□□□□□ -1.57
MMP3P08254 AL512427.1-201ENST00000618593 349 ntBASIC5.24□□□□□ -1.57
MMP3P08254 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.24□□□□□ -1.57
MMP3P08254 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.24□□□□□ -1.57
MMP3P08254 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.24□□□□□ -1.57
MMP3P08254 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
MMP3P08254 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.24□□□□□ -1.57
MMP3P08254 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.24□□□□□ -1.57
MMP3P08254 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
MMP3P08254 RAD17P1-201ENST00000418130 2042 ntBASIC5.24□□□□□ -1.57
MMP3P08254 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
MMP3P08254 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
MMP3P08254 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
MMP3P08254 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
MMP3P08254 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
MMP3P08254 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
MMP3P08254 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.23□□□□□ -1.57
MMP3P08254 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
MMP3P08254 AC112198.2-201ENST00000426589 6996 ntBASIC5.23□□□□□ -1.57
MMP3P08254 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
MMP3P08254 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
MMP3P08254 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
MMP3P08254 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
MMP3P08254 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
MMP3P08254 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.23□□□□□ -1.57
MMP3P08254 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
MMP3P08254 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
MMP3P08254 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
MMP3P08254 RNU6-252P-201ENST00000363232 107 ntBASIC5.23□□□□□ -1.57
MMP3P08254 MTCO2P8-201ENST00000412213 658 ntBASIC5.23□□□□□ -1.57
MMP3P08254 TATDN1P1-201ENST00000414123 891 ntBASIC5.23□□□□□ -1.57
MMP3P08254 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.23□□□□□ -1.57
MMP3P08254 NDUFA5P10-201ENST00000432147 357 ntBASIC5.23□□□□□ -1.57
MMP3P08254 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.23□□□□□ -1.57
MMP3P08254 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
MMP3P08254 YWHAZP2-201ENST00000440317 728 ntBASIC5.23□□□□□ -1.57
MMP3P08254 CYCSP24-201ENST00000445119 316 ntBASIC5.23□□□□□ -1.57
MMP3P08254 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
MMP3P08254 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
MMP3P08254 AC069277.2-201ENST00000454211 432 ntBASIC5.23□□□□□ -1.57
MMP3P08254 SETP6-201ENST00000479329 568 ntBASIC5.23□□□□□ -1.57
MMP3P08254 AC010374.1-201ENST00000503762 1237 ntBASIC5.23□□□□□ -1.57
MMP3P08254 SUMO2P5-201ENST00000506790 245 ntBASIC5.23□□□□□ -1.57
MMP3P08254 AC069306.1-201ENST00000507006 843 ntBASIC5.23□□□□□ -1.57
MMP3P08254 AC093840.1-201ENST00000511599 336 ntBASIC5.23□□□□□ -1.57
MMP3P08254 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
MMP3P08254 AC007016.1-201ENST00000512110 244 ntBASIC5.23□□□□□ -1.57
MMP3P08254 AC021451.1-201ENST00000523498 1129 ntBASIC5.23□□□□□ -1.57
MMP3P08254 AC005868.1-201ENST00000536421 331 ntBASIC5.23□□□□□ -1.57
MMP3P08254 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.23□□□□□ -1.57
MMP3P08254 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.23□□□□□ -1.57
MMP3P08254 FAM106CP-201ENST00000582212 507 ntBASIC5.23□□□□□ -1.57
MMP3P08254 AC115286.1-201ENST00000604298 434 ntBASIC5.23□□□□□ -1.57
MMP3P08254 AP001033.2-201ENST00000609701 1003 ntBASIC5.23□□□□□ -1.57
MMP3P08254 AC006946.3-201ENST00000609791 756 ntBASIC5.23□□□□□ -1.57
MMP3P08254 AC005962.2-201ENST00000611427 652 ntBASIC5.23□□□□□ -1.57
MMP3P08254 AC008759.3-201ENST00000613300 508 ntBASIC5.23□□□□□ -1.57
MMP3P08254 AL133243.1-201ENST00000614487 366 ntBASIC5.23□□□□□ -1.57
MMP3P08254 RNA5SP439-201ENST00000617595 124 ntBASIC5.23□□□□□ -1.57
MMP3P08254 AC126544.2-201ENST00000625174 749 ntBASIC5.23□□□□□ -1.57
MMP3P08254 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.23□□□□□ -1.57
MMP3P08254 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.23□□□□□ -1.57
MMP3P08254 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.23□□□□□ -1.57
MMP3P08254 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
MMP3P08254 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
MMP3P08254 MUC2-202ENST00000613187 4845 ntBASIC5.23□□□□□ -1.57
MMP3P08254 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
MMP3P08254 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms