Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A1P02462 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL4A1P02462 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
COL4A1P02462 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
COL4A1P02462 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.98□□□□□ -1.61
COL4A1P02462 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
COL4A1P02462 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.98□□□□□ -1.61
COL4A1P02462 AC007066.1-201ENST00000392902 381 ntBASIC4.98□□□□□ -1.61
COL4A1P02462 BX119904.3-201ENST00000428194 957 ntBASIC4.98□□□□□ -1.61
COL4A1P02462 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.98□□□□□ -1.61
COL4A1P02462 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL4A1P02462 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.98□□□□□ -1.61
COL4A1P02462 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.98□□□□□ -1.61
COL4A1P02462 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL4A1P02462 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.98□□□□□ -1.61
COL4A1P02462 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.98□□□□□ -1.61
COL4A1P02462 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.98□□□□□ -1.61
COL4A1P02462 AC107993.1-201ENST00000591343 684 ntBASIC4.98□□□□□ -1.61
COL4A1P02462 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL4A1P02462 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL4A1P02462 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
COL4A1P02462 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.98□□□□□ -1.61
COL4A1P02462 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
COL4A1P02462 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL4A1P02462 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
COL4A1P02462 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL4A1P02462 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.97□□□□□ -1.61
COL4A1P02462 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL4A1P02462 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
COL4A1P02462 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL4A1P02462 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL4A1P02462 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL4A1P02462 AL137918.1-201ENST00000624542 1922 ntBASIC4.97□□□□□ -1.61
COL4A1P02462 RN7SKP156-201ENST00000410308 342 ntBASIC4.97□□□□□ -1.61
COL4A1P02462 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL4A1P02462 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.97□□□□□ -1.61
COL4A1P02462 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.97□□□□□ -1.61
COL4A1P02462 RPL7P1-201ENST00000468161 747 ntBASIC4.97□□□□□ -1.61
COL4A1P02462 RPL7P9-201ENST00000468715 747 ntBASIC4.97□□□□□ -1.61
COL4A1P02462 AC026726.1-201ENST00000512859 601 ntBASIC4.97□□□□□ -1.61
COL4A1P02462 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.97□□□□□ -1.61
COL4A1P02462 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.97□□□□□ -1.61
COL4A1P02462 AC244505.7-201ENST00000599675 272 ntBASIC4.97□□□□□ -1.61
COL4A1P02462 AC024220.1-201ENST00000603675 484 ntBASIC4.97□□□□□ -1.61
COL4A1P02462 AL451086.1-201ENST00000605596 223 ntBASIC4.97□□□□□ -1.61
COL4A1P02462 ZNF285B-201ENST00000561698 1767 ntBASIC4.97□□□□□ -1.61
COL4A1P02462 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC4.97□□□□□ -1.61
COL4A1P02462 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL4A1P02462 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.97□□□□□ -1.61
COL4A1P02462 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL4A1P02462 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
COL4A1P02462 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
COL4A1P02462 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
COL4A1P02462 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL4A1P02462 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL4A1P02462 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
COL4A1P02462 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.61
COL4A1P02462 SNORA5A-201ENST00000384111 134 ntBASIC4.96□□□□□ -1.61
COL4A1P02462 MIR195-201ENST00000385194 87 ntBASIC4.96□□□□□ -1.61
COL4A1P02462 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
COL4A1P02462 PEX12P1-201ENST00000400284 1048 ntBASIC4.96□□□□□ -1.61
COL4A1P02462 AL359643.1-201ENST00000404109 423 ntBASIC4.96□□□□□ -1.61
COL4A1P02462 RPL23AP83-201ENST00000434984 473 ntBASIC4.96□□□□□ -1.61
COL4A1P02462 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.96□□□□□ -1.61
COL4A1P02462 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.96□□□□□ -1.61
COL4A1P02462 RPL7L1P8-201ENST00000469911 741 ntBASIC4.96□□□□□ -1.61
COL4A1P02462 RNA5SP179-201ENST00000517284 121 ntBASIC4.96□□□□□ -1.61
COL4A1P02462 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.96□□□□□ -1.61
COL4A1P02462 MIR4472-2-201ENST00000582069 67 ntBASIC4.96□□□□□ -1.61
COL4A1P02462 AC015726.1-201ENST00000602353 681 ntBASIC4.96□□□□□ -1.61
COL4A1P02462 AL606490.9-201ENST00000603331 271 ntBASIC4.96□□□□□ -1.61
COL4A1P02462 MIR432-201ENST00000606207 94 ntBASIC4.96□□□□□ -1.61
COL4A1P02462 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.96□□□□□ -1.61
COL4A1P02462 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL4A1P02462 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL4A1P02462 EIF3EP2-201ENST00000423042 1814 ntBASIC4.96□□□□□ -1.62
COL4A1P02462 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL4A1P02462 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
COL4A1P02462 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.96□□□□□ -1.62
COL4A1P02462 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL4A1P02462 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
COL4A1P02462 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL4A1P02462 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL4A1P02462 SOD2P1-201ENST00000396543 562 ntBASIC4.96□□□□□ -1.62
COL4A1P02462 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.96□□□□□ -1.62
COL4A1P02462 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.96□□□□□ -1.62
COL4A1P02462 AL161631.1-201ENST00000417933 486 ntBASIC4.96□□□□□ -1.62
COL4A1P02462 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.96□□□□□ -1.62
COL4A1P02462 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.96□□□□□ -1.62
COL4A1P02462 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL4A1P02462 AL031584.1-201ENST00000447169 754 ntBASIC4.96□□□□□ -1.62
COL4A1P02462 PRSS3P4-201ENST00000453323 162 ntBASIC4.96□□□□□ -1.62
COL4A1P02462 ACTR3P3-201ENST00000480448 893 ntBASIC4.96□□□□□ -1.62
COL4A1P02462 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.96□□□□□ -1.62
COL4A1P02462 MRPS21P9-201ENST00000571150 257 ntBASIC4.96□□□□□ -1.62
COL4A1P02462 AC112230.1-201ENST00000604342 547 ntBASIC4.96□□□□□ -1.62
COL4A1P02462 AL138721.1-201ENST00000616756 179 ntBASIC4.96□□□□□ -1.62
COL4A1P02462 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL4A1P02462 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL4A1P02462 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms