Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.06□□□□□ -1.6
COL2A1P02458 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.06□□□□□ -1.6
COL2A1P02458 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.06□□□□□ -1.6
COL2A1P02458 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.06□□□□□ -1.6
COL2A1P02458 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.06□□□□□ -1.6
COL2A1P02458 LSM3P2-201ENST00000551246 273 ntBASIC5.06□□□□□ -1.6
COL2A1P02458 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.06□□□□□ -1.6
COL2A1P02458 TVP23BP1-201ENST00000557500 617 ntBASIC5.06□□□□□ -1.6
COL2A1P02458 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL2A1P02458 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.06□□□□□ -1.6
COL2A1P02458 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.06□□□□□ -1.6
COL2A1P02458 AC092574.1-201ENST00000609771 420 ntBASIC5.06□□□□□ -1.6
COL2A1P02458 AC048344.4-201ENST00000619744 527 ntBASIC5.06□□□□□ -1.6
COL2A1P02458 AC009950.2-201ENST00000636548 183 ntBASIC5.06□□□□□ -1.6
COL2A1P02458 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
COL2A1P02458 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.06□□□□□ -1.6
COL2A1P02458 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL2A1P02458 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
COL2A1P02458 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.05□□□□□ -1.6
COL2A1P02458 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL2A1P02458 SYT14P1-202ENST00000600441 1448 ntBASIC5.05□□□□□ -1.6
COL2A1P02458 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL2A1P02458 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL2A1P02458 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.05□□□□□ -1.6
COL2A1P02458 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
COL2A1P02458 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL2A1P02458 RNU1-20P-201ENST00000363314 162 ntBASIC5.05□□□□□ -1.6
COL2A1P02458 RNA5SP283-201ENST00000365604 119 ntBASIC5.05□□□□□ -1.6
COL2A1P02458 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
COL2A1P02458 PTMAP2-201ENST00000397627 327 ntBASIC5.05□□□□□ -1.6
COL2A1P02458 RPL21P65-201ENST00000406094 466 ntBASIC5.05□□□□□ -1.6
COL2A1P02458 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.05□□□□□ -1.6
COL2A1P02458 RN7SKP182-201ENST00000410772 298 ntBASIC5.05□□□□□ -1.6
COL2A1P02458 RN7SKP167-201ENST00000411047 285 ntBASIC5.05□□□□□ -1.6
COL2A1P02458 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL2A1P02458 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.05□□□□□ -1.6
COL2A1P02458 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
COL2A1P02458 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.05□□□□□ -1.6
COL2A1P02458 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.05□□□□□ -1.6
COL2A1P02458 FTH1P25-201ENST00000447665 469 ntBASIC5.05□□□□□ -1.6
COL2A1P02458 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.05□□□□□ -1.6
COL2A1P02458 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL2A1P02458 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.05□□□□□ -1.6
COL2A1P02458 MTND3P3-201ENST00000505004 126 ntBASIC5.05□□□□□ -1.6
COL2A1P02458 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL2A1P02458 MTCO3P42-201ENST00000509488 518 ntBASIC5.05□□□□□ -1.6
COL2A1P02458 MTCO3P39-201ENST00000514812 518 ntBASIC5.05□□□□□ -1.6
COL2A1P02458 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.05□□□□□ -1.6
COL2A1P02458 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.05□□□□□ -1.6
COL2A1P02458 AC022616.2-201ENST00000523185 300 ntBASIC5.05□□□□□ -1.6
COL2A1P02458 DYNLL1P4-201ENST00000549314 266 ntBASIC5.05□□□□□ -1.6
COL2A1P02458 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.05□□□□□ -1.6
COL2A1P02458 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.05□□□□□ -1.6
COL2A1P02458 MIR4286-201ENST00000580651 93 ntBASIC5.05□□□□□ -1.6
COL2A1P02458 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.05□□□□□ -1.6
COL2A1P02458 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.05□□□□□ -1.6
COL2A1P02458 AC069200.1-201ENST00000609511 323 ntBASIC5.05□□□□□ -1.6
COL2A1P02458 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.05□□□□□ -1.6
COL2A1P02458 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.05□□□□□ -1.6
COL2A1P02458 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
COL2A1P02458 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL2A1P02458 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.05□□□□□ -1.6
COL2A1P02458 HSPD1P14-201ENST00000432666 1618 ntBASIC5.05□□□□□ -1.6
COL2A1P02458 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.04□□□□□ -1.6
COL2A1P02458 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
COL2A1P02458 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL2A1P02458 MAPK10-372ENST00000641954 3413 ntBASIC5.04□□□□□ -1.6
COL2A1P02458 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.04□□□□□ -1.6
COL2A1P02458 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.04□□□□□ -1.6
COL2A1P02458 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.04□□□□□ -1.6
COL2A1P02458 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.04□□□□□ -1.6
COL2A1P02458 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.04□□□□□ -1.6
COL2A1P02458 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
COL2A1P02458 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL2A1P02458 MIR449B-201ENST00000384995 97 ntBASIC5.04□□□□□ -1.6
COL2A1P02458 MT-RNR1-201ENST00000389680 954 ntBASIC5.04□□□□□ -1.6
COL2A1P02458 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.04□□□□□ -1.6
COL2A1P02458 RNU6-628P-201ENST00000410675 107 ntBASIC5.04□□□□□ -1.6
COL2A1P02458 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.04□□□□□ -1.6
COL2A1P02458 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.04□□□□□ -1.6
COL2A1P02458 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.04□□□□□ -1.6
COL2A1P02458 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.04□□□□□ -1.6
COL2A1P02458 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.04□□□□□ -1.6
COL2A1P02458 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.04□□□□□ -1.6
COL2A1P02458 AL591473.1-201ENST00000464297 313 ntBASIC5.04□□□□□ -1.6
COL2A1P02458 AC090013.1-201ENST00000485147 480 ntBASIC5.04□□□□□ -1.6
COL2A1P02458 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.04□□□□□ -1.6
COL2A1P02458 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
COL2A1P02458 AC006064.5-201ENST00000541782 248 ntBASIC5.04□□□□□ -1.6
COL2A1P02458 CCNG2P1-201ENST00000549521 1000 ntBASIC5.04□□□□□ -1.6
COL2A1P02458 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.04□□□□□ -1.6
COL2A1P02458 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.04□□□□□ -1.6
COL2A1P02458 AC027455.1-201ENST00000574104 594 ntBASIC5.04□□□□□ -1.6
COL2A1P02458 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.04□□□□□ -1.6
COL2A1P02458 AC004223.2-201ENST00000590309 544 ntBASIC5.04□□□□□ -1.6
COL2A1P02458 AC009948.4-201ENST00000604692 675 ntBASIC5.04□□□□□ -1.6
COL2A1P02458 AC097505.1-201ENST00000610199 565 ntBASIC5.04□□□□□ -1.6
COL2A1P02458 AL353726.1-201ENST00000614041 1000 ntBASIC5.04□□□□□ -1.6
COL2A1P02458 AL356094.1-201ENST00000624663 1212 ntBASIC5.04□□□□□ -1.6
COL2A1P02458 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms