Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 AC107977.1-201ENST00000355745 939 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 RNA5SP52-201ENST00000362448 134 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 RN7SKP187-201ENST00000365536 330 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 RNU4-31P-201ENST00000384211 141 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 NPM1P10-201ENST00000398310 865 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 MTND4P11-201ENST00000417020 1058 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 AC073464.3-201ENST00000422564 712 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 RPL21P91-201ENST00000429231 479 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 RN7SL168P-201ENST00000463821 279 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 AC094085.1-201ENST00000468914 584 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 RN7SL205P-201ENST00000490174 284 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 AC106872.2-201ENST00000494303 480 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 AC092349.1-201ENST00000504903 310 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 MTCO1P31-201ENST00000506355 492 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 PPBPP1-201ENST00000510807 373 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 RNU1-6P-201ENST00000516290 144 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 OR4A46P-201ENST00000527255 933 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 RFPL1S-203ENST00000539579 330 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 AC084757.1-201ENST00000559987 490 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 AC093249.4-201ENST00000564755 259 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 MIR548Y-201ENST00000582739 110 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 AC100847.1-201ENST00000611316 481 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 AC123768.4-201ENST00000616244 701 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 AC009318.3-201ENST00000616916 503 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 AP004607.9-201ENST00000618202 316 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 AL645927.2-201ENST00000618350 349 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 AC103858.2-201ENST00000621471 543 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 AC127024.6-201ENST00000621598 424 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 CR381572.2-201ENST00000624852 397 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 AC136428.4-201ENST00000634254 1155 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 MAPK10-263ENST00000641052 4307 ntBASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
KCNIP3Q9Y2W7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 RNA5SP22-201ENST00000365393 109 ntBASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 AL590762.2-201ENST00000395798 571 ntBASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 VN1R12P-201ENST00000403778 876 ntBASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 DNAJA1P4-201ENST00000406473 1166 ntBASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 DUTP5-201ENST00000406790 469 ntBASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 AL450992.3-201ENST00000413192 568 ntBASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 RPL21P43-201ENST00000425440 472 ntBASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 DYNLL1P7-201ENST00000429273 258 ntBASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 MTND4LP14-201ENST00000429447 288 ntBASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 XKRY2-201ENST00000442362 1093 ntBASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 AC239809.1-201ENST00000450470 217 ntBASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 AC092647.2-201ENST00000452998 253 ntBASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 AC084754.1-201ENST00000463466 464 ntBASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 OR2AO1P-201ENST00000476497 403 ntBASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 RN7SL184P-201ENST00000488308 297 ntBASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 AC025459.1-201ENST00000504072 156 ntBASIC3.88□□□□□ -1.79
KCNIP3Q9Y2W7 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms