Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 SNURFL-201ENST00000309296 343 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 RNA5SP455-201ENST00000365190 119 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AL590762.2-201ENST00000395798 571 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 RANP4-201ENST00000413361 655 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AC073464.3-201ENST00000422564 712 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 MTATP6P11-201ENST00000428071 670 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AC073069.1-201ENST00000428657 441 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 RPL21P91-201ENST00000429231 479 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 MTND4LP14-201ENST00000429447 288 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AC011753.3-201ENST00000443436 406 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AC017099.1-201ENST00000448261 1028 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 MTND2P25-201ENST00000449028 610 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 RPL7AP52-201ENST00000458096 790 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AC090142.1-201ENST00000465776 462 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AC108693.1-201ENST00000496068 432 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 SUMO1P1-201ENST00000497904 306 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 PGAM1P13-201ENST00000507497 754 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 BUD31P1-201ENST00000521828 359 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 MIR4716-201ENST00000579628 84 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AL023583.1-201ENST00000607518 1143 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AC135803.1-201ENST00000608748 565 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AC126915.2-201ENST00000610957 190 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AC079395.2-201ENST00000610982 737 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AC023509.5-201ENST00000617434 807 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 MIR7154-201ENST00000620673 73 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 CFTRP2-201ENST00000634304 199 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 U3.2-201ENST00000362981 210 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 RNA5SP22-201ENST00000365393 109 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 MIR143-201ENST00000385300 106 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 Z86062.1-201ENST00000406773 777 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 GTF2IP5-201ENST00000414608 731 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 UBTFL3-201ENST00000418934 1024 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 FAR1P1-201ENST00000427163 934 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 FTH1P6-201ENST00000430768 320 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 MTCYBP12-201ENST00000440559 1134 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 XKRY2-201ENST00000442362 1093 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 AL163193.1-201ENST00000444895 788 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 RPS15AP29-201ENST00000445539 400 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 HMGB3P21-201ENST00000452483 547 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 AL389915.2-201ENST00000454576 441 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 UBTFL6-201ENST00000477929 1024 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 AP000926.1-201ENST00000479573 241 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms