Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 MIR513B-201ENST00000385136 84 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 SNORA48.4-201ENST00000391089 134 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.09□□□□□ -1.43
SYNE4Q8N205 QRSL1P2-201ENST00000418582 964 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 AC006065.1-201ENST00000422539 802 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE4Q8N205 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC6.09□□□□□ -1.43
SYNE4Q8N205 CYCSP11-201ENST00000436426 315 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 AC122718.1-201ENST00000439448 744 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 AC073052.1-201ENST00000440417 714 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 MTCYBP12-201ENST00000440559 1134 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 OR10R1P-201ENST00000441524 1141 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 AC004980.3-201ENST00000447046 365 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 MTND1P29-201ENST00000448112 647 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 AC104849.1-201ENST00000462623 405 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 FAM133DP-201ENST00000464802 691 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.09□□□□□ -1.43
SYNE4Q8N205 RN7SL604P-201ENST00000492589 296 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 PPM1AP1-201ENST00000502740 1135 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 AC083829.1-201ENST00000503756 657 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 AC087373.1-201ENST00000524920 491 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC6.09□□□□□ -1.43
SYNE4Q8N205 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.09□□□□□ -1.43
SYNE4Q8N205 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.09□□□□□ -1.43
SYNE4Q8N205 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.09□□□□□ -1.43
SYNE4Q8N205 MTCYBP23-201ENST00000558717 1102 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.09□□□□□ -1.43
SYNE4Q8N205 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC6.09□□□□□ -1.43
SYNE4Q8N205 AC061975.8-201ENST00000587058 721 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.09□□□□□ -1.43
SYNE4Q8N205 VN1R78P-201ENST00000597393 564 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 AC103792.1-201ENST00000603591 919 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 OR7A19P-201ENST00000608051 733 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 AL049794.2-201ENST00000616301 365 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC6.09□□□□□ -1.43
SYNE4Q8N205 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.09□□□□□ -1.43
SYNE4Q8N205 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.09□□□□□ -1.43
SYNE4Q8N205 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
SYNE4Q8N205 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE4Q8N205 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE4Q8N205 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.09□□□□□ -1.44
SYNE4Q8N205 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
SYNE4Q8N205 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.44
SYNE4Q8N205 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SYNE4Q8N205 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE4Q8N205 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE4Q8N205 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE4Q8N205 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.08□□□□□ -1.44
SYNE4Q8N205 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.08□□□□□ -1.44
SYNE4Q8N205 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE4Q8N205 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE4Q8N205 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.08□□□□□ -1.44
SYNE4Q8N205 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SYNE4Q8N205 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE4Q8N205 IGKV7-3-201ENST00000357453 298 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 CD2-201ENST00000369477 478 ntTSL 2 BASIC6.08□□□□□ -1.44
SYNE4Q8N205 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC6.08□□□□□ -1.44
SYNE4Q8N205 AC241520.1-201ENST00000422654 1099 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.08□□□□□ -1.44
SYNE4Q8N205 AL732292.1-201ENST00000426692 226 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 RPS26P4-201ENST00000431743 355 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 KCTD10P1-201ENST00000434203 625 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 NPM1P18-201ENST00000434232 732 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 AC006994.1-201ENST00000438212 839 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 MTND4P6-201ENST00000438297 472 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE4Q8N205 NAP1L1P3-201ENST00000462291 880 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 PPIAP21-201ENST00000464473 501 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 RPL21P18-201ENST00000469899 480 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.08□□□□□ -1.44
SYNE4Q8N205 AC073358.1-201ENST00000505671 684 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 MTCO1P31-201ENST00000506355 492 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC6.08□□□□□ -1.44
SYNE4Q8N205 AC016559.2-201ENST00000510759 359 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 ENPP7P9-201ENST00000514456 627 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 RNU6-276P-201ENST00000516114 96 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 RNU2-30P-201ENST00000516209 141 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 AC067904.2-201ENST00000517322 1283 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 HMGB1P23-201ENST00000518743 568 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC6.08□□□□□ -1.44
SYNE4Q8N205 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.08□□□□□ -1.44
SYNE4Q8N205 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.08□□□□□ -1.44
SYNE4Q8N205 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.08□□□□□ -1.44
SYNE4Q8N205 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SYNE4Q8N205 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.08□□□□□ -1.44
SYNE4Q8N205 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.08□□□□□ -1.44
SYNE4Q8N205 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC6.08□□□□□ -1.44
SYNE4Q8N205 AC084373.1-201ENST00000603311 235 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 RNU6-1192P-201ENST00000612197 107 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE4Q8N205 AL121873.1-201ENST00000616013 524 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 AC022306.2-201ENST00000617563 647 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 RNU6-489P-201ENST00000618289 107 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.08□□□□□ -1.44
SYNE4Q8N205 AL669942.2-201ENST00000620352 697 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 AC019206.1-201ENST00000621938 425 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.08□□□□□ -1.44
SYNE4Q8N205 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6.08□□□□□ -1.44
SYNE4Q8N205 LINC02211-204ENST00000642024 1070 ntBASIC6.08□□□□□ -1.44
SYNE4Q8N205 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms