Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
HIST2H3AQ71DI3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HIST2H3AQ71DI3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 AC079741.1-201ENST00000321498 212 ntBASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 SNORD74.4-201ENST00000364129 80 ntBASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 AC093719.1-202ENST00000392735 373 ntBASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 RBMY2KP-201ENST00000418221 992 ntBASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 AL451050.1-201ENST00000450126 415 ntBASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 AC053481.1-201ENST00000467217 306 ntBASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 AC115286.1-201ENST00000604298 434 ntBASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 AC100847.1-201ENST00000611316 481 ntBASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 AC004241.3-201ENST00000611728 517 ntBASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 AL133243.1-201ENST00000614487 366 ntBASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 AC103858.2-201ENST00000621471 543 ntBASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 MIR4727-201ENST00000622232 55 ntBASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 AC021106.3-201ENST00000623925 531 ntBASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 AP001784.1-201ENST00000624107 428 ntBASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 LINC01808-202ENST00000641680 1116 ntBASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HIST2H3AQ71DI3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 OR4K15-201ENST00000305051 1216 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 MIR365B-201ENST00000362317 111 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 GLULP6-201ENST00000399502 913 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 RNU2-50P-201ENST00000410494 143 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 VN1R31P-201ENST00000417498 730 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 GAPDHP49-201ENST00000421421 961 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 IPMKP1-201ENST00000425988 855 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 NPM1P26-201ENST00000426339 738 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 RPS12P10-201ENST00000427031 377 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 RPS26P47-201ENST00000427219 348 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 UBE2V1P3-201ENST00000439651 417 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 AC114495.1-201ENST00000441274 436 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 RPL35AP28-201ENST00000459730 331 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 RNA5SP497-201ENST00000516081 97 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 AC051619.2-201ENST00000559063 397 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 AC068790.5-201ENST00000602741 355 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 AC008782.1-201ENST00000603386 430 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 AC024940.4-201ENST00000605507 246 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 AC096586.2-201ENST00000610260 441 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 AL161616.1-201ENST00000611867 286 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 AC026368.1-201ENST00000614934 690 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 AC023509.5-201ENST00000617434 807 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 AC006065.6-201ENST00000625201 545 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 OR56B2P-202ENST00000641377 2453 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 MFSD8-216ENST00000641147 4009 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 AL592148.3-201ENST00000608771 2646 ntBASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.89□□□□□ -1.79
HIST2H3AQ71DI3 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HIST2H3AQ71DI3 AC090971.4-201ENST00000560291 1800 ntBASIC3.88□□□□□ -1.79
HIST2H3AQ71DI3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HIST2H3AQ71DI3 AC011266.1-201ENST00000624119 3569 ntBASIC3.88□□□□□ -1.79
HIST2H3AQ71DI3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HIST2H3AQ71DI3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.88□□□□□ -1.79
HIST2H3AQ71DI3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
HIST2H3AQ71DI3 RNA5SP513-201ENST00000364648 118 ntBASIC3.88□□□□□ -1.79
HIST2H3AQ71DI3 MIR3065-201ENST00000390137 79 ntBASIC3.88□□□□□ -1.79
HIST2H3AQ71DI3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms