Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.95□□□□□ -1.46
RHBDL3P58872 SDAD1P1-202ENST00000524156 2051 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
RHBDL3P58872 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.95□□□□□ -1.46
RHBDL3P58872 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDL3P58872 AC099654.2-201ENST00000433031 1980 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDL3P58872 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDL3P58872 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDL3P58872 U6.112-201ENST00000384129 70 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 MIR192-201ENST00000384915 110 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 U3.32-201ENST00000408116 212 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 EIF4A1P3-201ENST00000411521 244 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 CYP1D1P-201ENST00000416662 1433 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 AC009506.2-201ENST00000420635 840 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 RPS6P14-201ENST00000425165 719 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.95□□□□□ -1.46
RHBDL3P58872 YWHAEP5-201ENST00000431545 765 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 RPS7P2-201ENST00000435134 607 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 TMX2P1-201ENST00000436507 708 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.95□□□□□ -1.46
RHBDL3P58872 AL450023.3-201ENST00000440592 271 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.95□□□□□ -1.46
RHBDL3P58872 GXYLT1P1-201ENST00000446657 490 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.95□□□□□ -1.46
RHBDL3P58872 CBX1P2-201ENST00000453841 458 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 RPL23AP56-201ENST00000460778 453 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.95□□□□□ -1.46
RHBDL3P58872 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDL3P58872 IGBP1P5-201ENST00000507524 1000 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 OR4A2P-201ENST00000527276 913 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDL3P58872 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.95□□□□□ -1.46
RHBDL3P58872 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.95□□□□□ -1.46
RHBDL3P58872 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.95□□□□□ -1.46
RHBDL3P58872 MIR4789-201ENST00000577469 82 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 AC091042.1-201ENST00000579213 173 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 MIR4270-201ENST00000581799 70 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 AC008507.2-201ENST00000588402 1176 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDL3P58872 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDL3P58872 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.95□□□□□ -1.46
RHBDL3P58872 MAPK10-304ENST00000641341 3984 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDL3P58872 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDL3P58872 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDL3P58872 AC104446.1-201ENST00000613728 1321 ntBASIC5.95□□□□□ -1.46
RHBDL3P58872 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDL3P58872 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.95□□□□□ -1.46
RHBDL3P58872 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDL3P58872 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDL3P58872 GVINP1-202ENST00000531871 7271 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDL3P58872 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDL3P58872 AC119744.1-201ENST00000454746 1715 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDL3P58872 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDL3P58872 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RHBDL3P58872 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDL3P58872 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDL3P58872 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RHBDL3P58872 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RHBDL3P58872 AC079741.1-201ENST00000321498 212 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDL3P58872 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDL3P58872 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
RHBDL3P58872 SNORA70.10-201ENST00000384515 134 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 SNORD65C-201ENST00000390962 71 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 AL355143.1-201ENST00000407101 841 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 FAR2P2-201ENST00000413041 594 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 PTP4A1P7-201ENST00000423476 514 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 FAR2P4-202ENST00000425399 584 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 FO393414.1-201ENST00000428697 1184 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 COX6CP13-201ENST00000428703 226 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 MTND6P18-201ENST00000439477 513 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 AL138878.2-201ENST00000440581 1241 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 AC092809.1-201ENST00000441469 474 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 AL592437.1-201ENST00000443781 492 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.94□□□□□ -1.46
RHBDL3P58872 SEPT14P24-201ENST00000447236 180 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.94□□□□□ -1.46
RHBDL3P58872 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.94□□□□□ -1.46
RHBDL3P58872 RPS17P2-201ENST00000461663 408 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 RPL21P18-201ENST00000469899 480 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 RPL23AP37-201ENST00000479658 549 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 RPSAP51-201ENST00000497462 645 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.94□□□□□ -1.46
RHBDL3P58872 AC010374.1-201ENST00000503762 1237 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 AC026414.1-201ENST00000504046 698 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 HMGB1P23-201ENST00000518743 568 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.94□□□□□ -1.46
RHBDL3P58872 AP003066.2-201ENST00000529375 555 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDL3P58872 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.94□□□□□ -1.46
RHBDL3P58872 AC084757.1-201ENST00000559987 490 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.94□□□□□ -1.46
RHBDL3P58872 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.94□□□□□ -1.46
RHBDL3P58872 MTCYBP13-201ENST00000578634 1093 ntBASIC5.94□□□□□ -1.46
RHBDL3P58872 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms