Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AL356968.2-201ENST00000412769 1257 ntBASIC5.64□□□□□ -1.51
RIPK4P57078 SEPT7P8-201ENST00000413308 775 ntBASIC5.64□□□□□ -1.51
RIPK4P57078 RSL24D1P6-201ENST00000426934 401 ntBASIC5.64□□□□□ -1.51
RIPK4P57078 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.64□□□□□ -1.51
RIPK4P57078 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.64□□□□□ -1.51
RIPK4P57078 AC009963.2-201ENST00000453431 138 ntBASIC5.64□□□□□ -1.51
RIPK4P57078 UQCRHP4-201ENST00000471686 272 ntBASIC5.64□□□□□ -1.51
RIPK4P57078 AC108475.1-201ENST00000507880 950 ntBASIC5.64□□□□□ -1.51
RIPK4P57078 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.64□□□□□ -1.51
RIPK4P57078 AL109766.1-201ENST00000555080 552 ntBASIC5.64□□□□□ -1.51
RIPK4P57078 AC011477.5-201ENST00000586571 259 ntBASIC5.64□□□□□ -1.51
RIPK4P57078 MIR6716-201ENST00000613413 80 ntBASIC5.64□□□□□ -1.51
RIPK4P57078 AL023881.1-201ENST00000621088 301 ntBASIC5.64□□□□□ -1.51
RIPK4P57078 AC010809.3-201ENST00000621310 641 ntBASIC5.64□□□□□ -1.51
RIPK4P57078 AC008013.2-202ENST00000637965 364 ntBASIC5.64□□□□□ -1.51
RIPK4P57078 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RIPK4P57078 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RIPK4P57078 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RIPK4P57078 MTND4P26-201ENST00000415971 1359 ntBASIC5.64□□□□□ -1.51
RIPK4P57078 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RIPK4P57078 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
RIPK4P57078 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RIPK4P57078 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.63□□□□□ -1.51
RIPK4P57078 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RIPK4P57078 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
RIPK4P57078 AL049693.1-201ENST00000402760 611 ntBASIC5.63□□□□□ -1.51
RIPK4P57078 AL445213.1-201ENST00000412589 747 ntBASIC5.63□□□□□ -1.51
RIPK4P57078 CEACAMP8-201ENST00000413902 580 ntBASIC5.63□□□□□ -1.51
RIPK4P57078 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.63□□□□□ -1.51
RIPK4P57078 CEACAMP1-201ENST00000434624 1035 ntBASIC5.63□□□□□ -1.51
RIPK4P57078 RPSAP41-201ENST00000439695 860 ntBASIC5.63□□□□□ -1.51
RIPK4P57078 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RIPK4P57078 RPL23AP81-201ENST00000455252 467 ntBASIC5.63□□□□□ -1.51
RIPK4P57078 AC012158.1-204ENST00000483430 465 ntBASIC5.63□□□□□ -1.51
RIPK4P57078 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.63□□□□□ -1.51
RIPK4P57078 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.63□□□□□ -1.51
RIPK4P57078 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.63□□□□□ -1.51
RIPK4P57078 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.63□□□□□ -1.51
RIPK4P57078 RNA5SP73-201ENST00000516744 108 ntBASIC5.63□□□□□ -1.51
RIPK4P57078 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.63□□□□□ -1.51
RIPK4P57078 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.63□□□□□ -1.51
RIPK4P57078 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.63□□□□□ -1.51
RIPK4P57078 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RIPK4P57078 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RIPK4P57078 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RIPK4P57078 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
RIPK4P57078 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.62□□□□□ -1.51
RIPK4P57078 SNORA70.2-201ENST00000364506 135 ntBASIC5.62□□□□□ -1.51
RIPK4P57078 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.62□□□□□ -1.51
RIPK4P57078 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.62□□□□□ -1.51
RIPK4P57078 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.62□□□□□ -1.51
RIPK4P57078 OR2X1P-201ENST00000421144 687 ntBASIC5.62□□□□□ -1.51
RIPK4P57078 EIF1P3-201ENST00000423841 334 ntBASIC5.62□□□□□ -1.51
RIPK4P57078 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.62□□□□□ -1.51
RIPK4P57078 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RIPK4P57078 EEF1A1P1-201ENST00000447052 739 ntBASIC5.62□□□□□ -1.51
RIPK4P57078 PPIAP21-201ENST00000464473 501 ntBASIC5.62□□□□□ -1.51
RIPK4P57078 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.62□□□□□ -1.51
RIPK4P57078 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.62□□□□□ -1.51
RIPK4P57078 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RIPK4P57078 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.62□□□□□ -1.51
RIPK4P57078 AC138701.1-201ENST00000524329 714 ntBASIC5.62□□□□□ -1.51
RIPK4P57078 AP003730.1-201ENST00000524605 285 ntBASIC5.62□□□□□ -1.51
RIPK4P57078 TVP23BP1-201ENST00000557500 617 ntBASIC5.62□□□□□ -1.51
RIPK4P57078 MIR4697-201ENST00000582977 78 ntBASIC5.62□□□□□ -1.51
RIPK4P57078 AC008759.1-201ENST00000589783 983 ntBASIC5.62□□□□□ -1.51
RIPK4P57078 AC107993.1-201ENST00000591343 684 ntBASIC5.62□□□□□ -1.51
RIPK4P57078 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.62□□□□□ -1.51
RIPK4P57078 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.62□□□□□ -1.51
RIPK4P57078 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RIPK4P57078 AL161729.3-201ENST00000603533 673 ntBASIC5.62□□□□□ -1.51
RIPK4P57078 AL138721.1-201ENST00000616756 179 ntBASIC5.62□□□□□ -1.51
RIPK4P57078 AC019278.1-201ENST00000623516 479 ntBASIC5.62□□□□□ -1.51
RIPK4P57078 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.62□□□□□ -1.51
RIPK4P57078 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.62□□□□□ -1.51
RIPK4P57078 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
RIPK4P57078 KPNA2P2-201ENST00000419546 1489 ntBASIC5.62□□□□□ -1.51
RIPK4P57078 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.62□□□□□ -1.51
RIPK4P57078 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RIPK4P57078 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.62□□□□□ -1.51
RIPK4P57078 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RIPK4P57078 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
RIPK4P57078 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.61□□□□□ -1.51
RIPK4P57078 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.61□□□□□ -1.51
RIPK4P57078 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.61□□□□□ -1.51
RIPK4P57078 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.61□□□□□ -1.51
RIPK4P57078 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RIPK4P57078 GOLGA5P1-201ENST00000507317 980 ntBASIC5.61□□□□□ -1.51
RIPK4P57078 KCTD9P2-201ENST00000512203 1013 ntBASIC5.61□□□□□ -1.51
RIPK4P57078 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.61□□□□□ -1.51
RIPK4P57078 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.61□□□□□ -1.51
RIPK4P57078 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.61□□□□□ -1.51
RIPK4P57078 AC006064.5-201ENST00000541782 248 ntBASIC5.61□□□□□ -1.51
RIPK4P57078 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RIPK4P57078 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.61□□□□□ -1.51
RIPK4P57078 PARP1P2-201ENST00000556806 195 ntBASIC5.61□□□□□ -1.51
RIPK4P57078 VPS35P1-201ENST00000563400 1518 ntBASIC5.61□□□□□ -1.51
RIPK4P57078 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.61□□□□□ -1.51
RIPK4P57078 AC005261.4-201ENST00000600047 1385 ntBASIC5.61□□□□□ -1.51
RIPK4P57078 AC016252.1-201ENST00000609721 474 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms