Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 LRRC37BP1-201ENST00000398851 714 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 RNU4-74P-201ENST00000411280 161 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 MTCO2P8-201ENST00000412213 658 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.87□□□□□ -1.63
CLCNKAP51800 AC106883.1-201ENST00000418805 562 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.87□□□□□ -1.63
CLCNKAP51800 PNRC2P1-201ENST00000423940 420 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 MED6P1-201ENST00000439659 713 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 RPL7AP61-201ENST00000443410 636 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 AC112498.1-201ENST00000444401 332 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 AC069540.1-201ENST00000446320 988 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.87□□□□□ -1.63
CLCNKAP51800 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.87□□□□□ -1.63
CLCNKAP51800 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.87□□□□□ -1.63
CLCNKAP51800 AL691482.1-201ENST00000453255 87 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 RPS17P2-201ENST00000461663 408 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 AC092324.1-201ENST00000468671 324 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 CDH12P2-201ENST00000504393 298 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 MRPS33P2-201ENST00000507850 322 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLCNKAP51800 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.87□□□□□ -1.63
CLCNKAP51800 AC021451.1-201ENST00000523498 1129 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.87□□□□□ -1.63
CLCNKAP51800 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLCNKAP51800 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLCNKAP51800 GCSHP4-201ENST00000538792 439 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLCNKAP51800 AC009117.1-201ENST00000563948 554 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 AC116553.2-201ENST00000564203 463 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 AC106734.1-201ENST00000568646 663 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 AP000919.1-202ENST00000581139 1264 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 AC124283.4-201ENST00000581815 456 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.87□□□□□ -1.63
CLCNKAP51800 AC245100.7-201ENST00000609678 442 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 AP001784.1-201ENST00000624107 428 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLCNKAP51800 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
CLCNKAP51800 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLCNKAP51800 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.87□□□□□ -1.63
CLCNKAP51800 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.87□□□□□ -1.63
CLCNKAP51800 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLCNKAP51800 AP000756.2-201ENST00000624168 2567 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 DDX18P3-201ENST00000404856 2007 ntBASIC4.87□□□□□ -1.63
CLCNKAP51800 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLCNKAP51800 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CLCNKAP51800 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.87□□□□□ -1.63
CLCNKAP51800 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLCNKAP51800 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLCNKAP51800 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLCNKAP51800 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.86□□□□□ -1.63
CLCNKAP51800 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.86□□□□□ -1.63
CLCNKAP51800 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CLCNKAP51800 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLCNKAP51800 AL451142.2-201ENST00000429076 2090 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 SDAD1P1-202ENST00000524156 2051 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
CLCNKAP51800 AC010385.1-201ENST00000412374 256 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.86□□□□□ -1.63
CLCNKAP51800 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.86□□□□□ -1.63
CLCNKAP51800 AC241520.1-201ENST00000422654 1099 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 AC104837.2-201ENST00000427236 424 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 AL353597.2-202ENST00000434901 373 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 AL772161.1-201ENST00000439130 476 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 AL450263.2-201ENST00000439400 589 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.86□□□□□ -1.63
CLCNKAP51800 AC023512.1-201ENST00000444513 499 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 AC044797.1-201ENST00000445744 679 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.86□□□□□ -1.63
CLCNKAP51800 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.86□□□□□ -1.63
CLCNKAP51800 OFD1P3Y-201ENST00000453312 783 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 snoU109.3-201ENST00000459477 145 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.86□□□□□ -1.63
CLCNKAP51800 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.86□□□□□ -1.63
CLCNKAP51800 RN7SL346P-201ENST00000491561 294 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 RN7SL591P-201ENST00000496150 292 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 MYL12BP2-201ENST00000503948 512 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.86□□□□□ -1.63
CLCNKAP51800 BTF3P13-201ENST00000513224 490 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.86□□□□□ -1.63
CLCNKAP51800 HIGD1AP18-201ENST00000520730 278 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.86□□□□□ -1.63
CLCNKAP51800 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.86□□□□□ -1.63
CLCNKAP51800 MTND1P24-201ENST00000552175 861 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 AC127024.5-201ENST00000580085 462 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 MIR4737-201ENST00000583979 81 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.86□□□□□ -1.63
CLCNKAP51800 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.86□□□□□ -1.63
CLCNKAP51800 FAM25E-202ENST00000608562 189 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 AC116651.1-201ENST00000609724 556 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 RNU6-1192P-201ENST00000612197 107 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 VN1R9P-201ENST00000614184 867 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 RMST_10.1-201ENST00000616309 154 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 RNU6-489P-201ENST00000618289 107 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.86□□□□□ -1.63
CLCNKAP51800 AC019206.1-201ENST00000621938 425 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 AC015908.5-201ENST00000623289 343 ntBASIC4.86□□□□□ -1.63
CLCNKAP51800 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.86□□□□□ -1.63
CLCNKAP51800 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.86□□□□□ -1.63
CLCNKAP51800 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLCNKAP51800 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms