Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RN7SL354P-201ENST00000469282 294 ntBASIC3.42□□□□□ -1.86
HLA-DMBP28068 RPS26P28-201ENST00000470806 348 ntBASIC3.42□□□□□ -1.86
HLA-DMBP28068 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.42□□□□□ -1.86
HLA-DMBP28068 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DMBP28068 AC108022.1-201ENST00000493466 478 ntBASIC3.42□□□□□ -1.86
HLA-DMBP28068 RPS6P4-201ENST00000494693 758 ntBASIC3.42□□□□□ -1.86
HLA-DMBP28068 AC083829.1-201ENST00000503756 657 ntBASIC3.42□□□□□ -1.86
HLA-DMBP28068 AC007016.1-201ENST00000512110 244 ntBASIC3.42□□□□□ -1.86
HLA-DMBP28068 RNA5SP154-201ENST00000516193 111 ntBASIC3.42□□□□□ -1.86
HLA-DMBP28068 OR5M2P-201ENST00000529003 936 ntBASIC3.42□□□□□ -1.86
HLA-DMBP28068 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HLA-DMBP28068 SULT1C2P2-201ENST00000562517 294 ntBASIC3.42□□□□□ -1.86
HLA-DMBP28068 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DMBP28068 MTND6P33-201ENST00000571794 183 ntBASIC3.42□□□□□ -1.86
HLA-DMBP28068 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DMBP28068 RPL27-207ENST00000590864 569 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DMBP28068 RPL7P50-201ENST00000600588 727 ntBASIC3.42□□□□□ -1.86
HLA-DMBP28068 AC098935.2-201ENST00000604222 466 ntBASIC3.42□□□□□ -1.86
HLA-DMBP28068 AL160290.3-201ENST00000604869 165 ntBASIC3.42□□□□□ -1.86
HLA-DMBP28068 AP002360.3-201ENST00000607673 710 ntBASIC3.42□□□□□ -1.86
HLA-DMBP28068 RMST_9.1-201ENST00000619945 193 ntBASIC3.42□□□□□ -1.86
HLA-DMBP28068 AL669942.2-201ENST00000620352 697 ntBASIC3.42□□□□□ -1.86
HLA-DMBP28068 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HLA-DMBP28068 AP000346.3-201ENST00000622821 210 ntBASIC3.42□□□□□ -1.86
HLA-DMBP28068 AP003072.5-201ENST00000623872 773 ntBASIC3.42□□□□□ -1.86
HLA-DMBP28068 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DMBP28068 OR2L1P-202ENST00000641567 1023 ntBASIC3.42□□□□□ -1.86
HLA-DMBP28068 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DMBP28068 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.42□□□□□ -1.86
HLA-DMBP28068 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DMBP28068 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HLA-DMBP28068 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DMBP28068 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DMBP28068 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DMBP28068 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DMBP28068 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DMBP28068 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DMBP28068 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DMBP28068 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DMBP28068 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DMBP28068 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DMBP28068 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
HLA-DMBP28068 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DMBP28068 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
HLA-DMBP28068 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DMBP28068 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
HLA-DMBP28068 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DMBP28068 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DMBP28068 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DMBP28068 AC021146.4-201ENST00000309229 279 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 AC079741.1-201ENST00000321498 212 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 AC067945.1-201ENST00000342609 618 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 OR13C3-201ENST00000374781 1108 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HLA-DMBP28068 Z98745.1-201ENST00000402553 494 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 RN7SKP106-201ENST00000410832 272 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 AC098592.2-201ENST00000413158 265 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 AC069213.2-201ENST00000420238 366 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DMBP28068 AC244033.1-201ENST00000426826 870 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 DNAJC19P7-201ENST00000428811 344 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 RPL23AP25-201ENST00000430973 463 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 CDY14P-201ENST00000431260 1014 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DMBP28068 CDY12P-201ENST00000440679 1015 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 CDY13P-201ENST00000445813 1015 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 CDY23P-201ENST00000451661 1014 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
HLA-DMBP28068 AC010326.1-201ENST00000462726 602 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 RPL23AP2-201ENST00000471227 466 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 RN7SL459P-201ENST00000481078 302 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 AC012158.1-204ENST00000483430 465 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 AC093720.1-201ENST00000505681 714 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DMBP28068 AC092593.2-201ENST00000513866 913 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DMBP28068 RNA5SP497-201ENST00000516081 97 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 RAB9BP1-201ENST00000519581 626 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DMBP28068 AC100770.1-201ENST00000532310 322 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.41□□□□□ -1.86
HLA-DMBP28068 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DMBP28068 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DMBP28068 AL121834.1-201ENST00000572284 509 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.41□□□□□ -1.86
HLA-DMBP28068 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DMBP28068 HMGB2P1-201ENST00000591146 634 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 AC023762.1-201ENST00000603280 584 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 AC010201.1-201ENST00000605051 540 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 AL135786.2-201ENST00000608422 615 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 MIR6798-201ENST00000612887 67 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HLA-DMBP28068 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
HLA-DMBP28068 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DMBP28068 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DMBP28068 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DMBP28068 AC006971.1-201ENST00000407916 4486 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DMBP28068 AC068254.2-201ENST00000623938 3577 ntBASIC3.41□□□□□ -1.86
HLA-DMBP28068 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms