Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.85□□□□□ -1.63
TPM1P09493 ELOCP10-201ENST00000440624 327 ntBASIC4.85□□□□□ -1.63
TPM1P09493 CEACAMP7-201ENST00000444105 496 ntBASIC4.85□□□□□ -1.63
TPM1P09493 AL162388.1-201ENST00000450912 352 ntBASIC4.85□□□□□ -1.63
TPM1P09493 AL354710.1-201ENST00000453641 246 ntBASIC4.85□□□□□ -1.63
TPM1P09493 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.85□□□□□ -1.63
TPM1P09493 AC079804.1-201ENST00000461922 436 ntBASIC4.85□□□□□ -1.63
TPM1P09493 RPSAP50-201ENST00000481955 852 ntBASIC4.85□□□□□ -1.63
TPM1P09493 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.85□□□□□ -1.63
TPM1P09493 AC006499.3-201ENST00000506077 748 ntBASIC4.85□□□□□ -1.63
TPM1P09493 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.85□□□□□ -1.63
TPM1P09493 AC147055.3-201ENST00000510547 851 ntBASIC4.85□□□□□ -1.63
TPM1P09493 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.85□□□□□ -1.63
TPM1P09493 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.85□□□□□ -1.63
TPM1P09493 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.85□□□□□ -1.63
TPM1P09493 AC107016.1-201ENST00000550463 337 ntBASIC4.85□□□□□ -1.63
TPM1P09493 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.85□□□□□ -1.63
TPM1P09493 AC090888.3-201ENST00000558917 509 ntBASIC4.85□□□□□ -1.63
TPM1P09493 MIR3667-201ENST00000581025 74 ntBASIC4.85□□□□□ -1.63
TPM1P09493 MIR3176-201ENST00000582210 90 ntBASIC4.85□□□□□ -1.63
TPM1P09493 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TPM1P09493 AC123786.2-201ENST00000603459 275 ntBASIC4.85□□□□□ -1.63
TPM1P09493 ELOCP34-201ENST00000604436 327 ntBASIC4.85□□□□□ -1.63
TPM1P09493 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.85□□□□□ -1.63
TPM1P09493 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.85□□□□□ -1.63
TPM1P09493 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.85□□□□□ -1.63
TPM1P09493 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TPM1P09493 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TPM1P09493 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TPM1P09493 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TPM1P09493 AC009313.2-201ENST00000417893 1941 ntBASIC4.85□□□□□ -1.63
TPM1P09493 AC132825.1-201ENST00000463573 2247 ntBASIC4.84□□□□□ -1.63
TPM1P09493 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TPM1P09493 AC018555.1-201ENST00000567548 1980 ntBASIC4.84□□□□□ -1.63
TPM1P09493 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.84□□□□□ -1.63
TPM1P09493 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
TPM1P09493 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
TPM1P09493 RNA5SP388-201ENST00000362584 119 ntBASIC4.84□□□□□ -1.63
TPM1P09493 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TPM1P09493 AL603766.1-201ENST00000407763 664 ntBASIC4.84□□□□□ -1.63
TPM1P09493 RNA5SP113-201ENST00000410486 84 ntBASIC4.84□□□□□ -1.63
TPM1P09493 RPS20P14-201ENST00000412545 360 ntBASIC4.84□□□□□ -1.63
TPM1P09493 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.84□□□□□ -1.63
TPM1P09493 RPL6P29-201ENST00000414863 865 ntBASIC4.84□□□□□ -1.63
TPM1P09493 AL391219.1-201ENST00000422570 483 ntBASIC4.84□□□□□ -1.63
TPM1P09493 RBMY1KP-201ENST00000423480 476 ntBASIC4.84□□□□□ -1.63
TPM1P09493 MTND2P11-201ENST00000423638 648 ntBASIC4.84□□□□□ -1.63
TPM1P09493 AC093084.1-201ENST00000424233 687 ntBASIC4.84□□□□□ -1.63
TPM1P09493 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.84□□□□□ -1.63
TPM1P09493 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.84□□□□□ -1.63
TPM1P09493 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TPM1P09493 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.84□□□□□ -1.63
TPM1P09493 EEF1B2P5-201ENST00000444820 548 ntBASIC4.84□□□□□ -1.63
TPM1P09493 AC005532.2-201ENST00000467154 373 ntBASIC4.84□□□□□ -1.63
TPM1P09493 MTND4LP2-201ENST00000502312 285 ntBASIC4.84□□□□□ -1.63
TPM1P09493 AC017037.1-201ENST00000508460 471 ntBASIC4.84□□□□□ -1.63
TPM1P09493 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.84□□□□□ -1.63
TPM1P09493 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.84□□□□□ -1.63
TPM1P09493 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.84□□□□□ -1.63
TPM1P09493 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.84□□□□□ -1.63
TPM1P09493 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.84□□□□□ -1.63
TPM1P09493 MIR432-201ENST00000606207 94 ntBASIC4.84□□□□□ -1.63
TPM1P09493 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.84□□□□□ -1.63
TPM1P09493 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
TPM1P09493 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
TPM1P09493 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
TPM1P09493 AL031985.3-201ENST00000565390 2449 ntBASIC4.84□□□□□ -1.64
TPM1P09493 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
TPM1P09493 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
TPM1P09493 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
TPM1P09493 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.84□□□□□ -1.64
TPM1P09493 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
TPM1P09493 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
TPM1P09493 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.83□□□□□ -1.64
TPM1P09493 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TPM1P09493 RNA5SP435-201ENST00000364044 108 ntBASIC4.83□□□□□ -1.64
TPM1P09493 RNU6-167P-201ENST00000384292 106 ntBASIC4.83□□□□□ -1.64
TPM1P09493 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.83□□□□□ -1.64
TPM1P09493 MIR1911-201ENST00000410783 80 ntBASIC4.83□□□□□ -1.64
TPM1P09493 RN7SKP206-201ENST00000410823 293 ntBASIC4.83□□□□□ -1.64
TPM1P09493 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.83□□□□□ -1.64
TPM1P09493 COX6B1P1-201ENST00000415962 213 ntBASIC4.83□□□□□ -1.64
TPM1P09493 RPL23AP4-201ENST00000427757 463 ntBASIC4.83□□□□□ -1.64
TPM1P09493 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.83□□□□□ -1.64
TPM1P09493 RPL23AP93-201ENST00000440847 484 ntBASIC4.83□□□□□ -1.64
TPM1P09493 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.83□□□□□ -1.64
TPM1P09493 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.83□□□□□ -1.64
TPM1P09493 RPS27AP17-201ENST00000463344 455 ntBASIC4.83□□□□□ -1.64
TPM1P09493 AC105918.1-201ENST00000474399 838 ntBASIC4.83□□□□□ -1.64
TPM1P09493 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.83□□□□□ -1.64
TPM1P09493 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.83□□□□□ -1.64
TPM1P09493 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.83□□□□□ -1.64
TPM1P09493 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.83□□□□□ -1.64
TPM1P09493 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.83□□□□□ -1.64
TPM1P09493 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.83□□□□□ -1.64
TPM1P09493 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.83□□□□□ -1.64
TPM1P09493 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.83□□□□□ -1.64
TPM1P09493 MIR6853-201ENST00000619642 74 ntBASIC4.83□□□□□ -1.64
TPM1P09493 AC019278.1-201ENST00000623516 479 ntBASIC4.83□□□□□ -1.64
TPM1P09493 AL356489.2-201ENST00000566968 3528 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms