Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 RPS29P17-201ENST00000430795 166 ntBASIC5.9□□□□□ -1.47
COL3A1P02461 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.9□□□□□ -1.47
COL3A1P02461 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.9□□□□□ -1.47
COL3A1P02461 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
COL3A1P02461 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.9□□□□□ -1.47
COL3A1P02461 AC007537.2-201ENST00000472093 511 ntBASIC5.9□□□□□ -1.47
COL3A1P02461 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
COL3A1P02461 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.9□□□□□ -1.47
COL3A1P02461 GTF2IP11-201ENST00000526931 420 ntBASIC5.9□□□□□ -1.47
COL3A1P02461 DUXAP5-201ENST00000529668 529 ntBASIC5.9□□□□□ -1.47
COL3A1P02461 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.9□□□□□ -1.47
COL3A1P02461 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.9□□□□□ -1.47
COL3A1P02461 MIR3138-201ENST00000585238 82 ntBASIC5.9□□□□□ -1.47
COL3A1P02461 AC133794.1-201ENST00000602731 914 ntBASIC5.9□□□□□ -1.47
COL3A1P02461 ABI1P1-201ENST00000603375 1120 ntBASIC5.9□□□□□ -1.47
COL3A1P02461 AL160290.3-201ENST00000604869 165 ntBASIC5.9□□□□□ -1.47
COL3A1P02461 AC114781.5-201ENST00000615297 108 ntBASIC5.9□□□□□ -1.47
COL3A1P02461 AP005019.3-201ENST00000620418 560 ntBASIC5.9□□□□□ -1.47
COL3A1P02461 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.9□□□□□ -1.47
COL3A1P02461 AP002967.1-201ENST00000624203 539 ntBASIC5.9□□□□□ -1.47
COL3A1P02461 AL356118.1-201ENST00000635272 1078 ntBASIC5.9□□□□□ -1.47
COL3A1P02461 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.89□□□□□ -1.47
COL3A1P02461 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL3A1P02461 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
COL3A1P02461 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.89□□□□□ -1.47
COL3A1P02461 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.89□□□□□ -1.47
COL3A1P02461 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL3A1P02461 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
COL3A1P02461 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.89□□□□□ -1.47
COL3A1P02461 AC106754.1-201ENST00000562632 1513 ntBASIC5.89□□□□□ -1.47
COL3A1P02461 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
COL3A1P02461 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.89□□□□□ -1.47
COL3A1P02461 MIR331-201ENST00000362302 94 ntBASIC5.89□□□□□ -1.47
COL3A1P02461 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.89□□□□□ -1.47
COL3A1P02461 AL049693.1-201ENST00000402760 611 ntBASIC5.89□□□□□ -1.47
COL3A1P02461 NRBF2P2-201ENST00000413087 861 ntBASIC5.89□□□□□ -1.47
COL3A1P02461 MTCYBP7-201ENST00000419540 1134 ntBASIC5.89□□□□□ -1.47
COL3A1P02461 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.89□□□□□ -1.47
COL3A1P02461 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.89□□□□□ -1.47
COL3A1P02461 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.89□□□□□ -1.47
COL3A1P02461 AC012671.1-201ENST00000451912 203 ntBASIC5.89□□□□□ -1.47
COL3A1P02461 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.89□□□□□ -1.47
COL3A1P02461 AC010627.1-201ENST00000503819 1294 ntBASIC5.89□□□□□ -1.47
COL3A1P02461 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.89□□□□□ -1.47
COL3A1P02461 AC117522.2-201ENST00000510049 657 ntBASIC5.89□□□□□ -1.47
COL3A1P02461 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.89□□□□□ -1.47
COL3A1P02461 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL3A1P02461 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.89□□□□□ -1.47
COL3A1P02461 AC125494.2-201ENST00000602431 657 ntBASIC5.89□□□□□ -1.47
COL3A1P02461 AC009704.2-201ENST00000618739 483 ntBASIC5.89□□□□□ -1.47
COL3A1P02461 AC026585.1-201ENST00000619582 524 ntBASIC5.89□□□□□ -1.47
COL3A1P02461 AC007546.2-201ENST00000623996 360 ntBASIC5.89□□□□□ -1.47
COL3A1P02461 AC009951.1-201ENST00000623674 2614 ntBASIC5.89□□□□□ -1.47
COL3A1P02461 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
COL3A1P02461 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.88□□□□□ -1.47
COL3A1P02461 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
COL3A1P02461 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.88□□□□□ -1.47
COL3A1P02461 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.88□□□□□ -1.47
COL3A1P02461 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL3A1P02461 AL132656.3-201ENST00000606384 1595 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 Y_RNA.126-201ENST00000363382 111 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL3A1P02461 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL3A1P02461 SNORD116-2-201ENST00000384274 95 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 SNORD116-6-201ENST00000384711 96 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 MIR3065-201ENST00000390137 79 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 AL035405.1-201ENST00000400795 710 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 AC062016.2-201ENST00000420950 676 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 MTCYBP31-201ENST00000438855 1122 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 ACTR3P2-201ENST00000439585 1257 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 VN1R96P-201ENST00000446052 858 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 DDX39BP2-208ENST00000453923 258 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.88□□□□□ -1.47
COL3A1P02461 AC096992.1-201ENST00000459808 709 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 RPS27AP17-201ENST00000463344 455 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 AC112206.1-201ENST00000468416 477 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 AC108729.2-201ENST00000476543 840 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 METTL15P1-201ENST00000481421 1045 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 OR11I1P-201ENST00000486033 954 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 AC025768.1-201ENST00000510057 267 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 RN7SKP21-201ENST00000516503 220 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.88□□□□□ -1.47
COL3A1P02461 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.88□□□□□ -1.47
COL3A1P02461 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.88□□□□□ -1.47
COL3A1P02461 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.88□□□□□ -1.47
COL3A1P02461 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.88□□□□□ -1.47
COL3A1P02461 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL3A1P02461 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.88□□□□□ -1.47
COL3A1P02461 MRPS36P5-201ENST00000551909 298 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 AL049838.1-201ENST00000563647 981 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 AC233266.2-201ENST00000567067 528 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.88□□□□□ -1.47
COL3A1P02461 AC023575.1-201ENST00000580510 358 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.88□□□□□ -1.47
COL3A1P02461 AC079587.1-201ENST00000603846 277 ntBASIC5.88□□□□□ -1.47
COL3A1P02461 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.88□□□□□ -1.47
COL3A1P02461 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.88□□□□□ -1.47
COL3A1P02461 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.88□□□□□ -1.47
COL3A1P02461 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms