Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 RNU1-74P-201ENST00000384108 171 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 RPL22P18-201ENST00000417197 377 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 VN1R31P-201ENST00000417498 730 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 FABP5P3-201ENST00000437960 408 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AL358794.1-201ENST00000445689 381 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AL591363.1-201ENST00000450091 483 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 NAP1L1P3-201ENST00000462291 880 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 RN7SL826P-201ENST00000479724 288 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 RN7SL184P-201ENST00000488308 297 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AC134050.1-201ENST00000495088 933 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 OR10V3P-201ENST00000525712 725 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AP000916.1-201ENST00000533869 835 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AC007834.2-201ENST00000536310 343 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 OSBPL9P5-201ENST00000542581 171 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AL121839.1-201ENST00000556233 1185 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AC025918.2-201ENST00000558683 763 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 ZNF92P3-201ENST00000596594 954 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AC107952.2-201ENST00000606048 486 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AC008115.4-201ENST00000619780 775 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AC004232.3-201ENST00000622977 525 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AL034370.1-201ENST00000397254 1590 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 UGT2B26P-201ENST00000508672 1613 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AC120338.1-201ENST00000625074 1541 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AC114786.1-201ENST00000512892 1415 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 AC235565.1-201ENST00000456962 1325 ntBASIC4.72□□□□□ -1.65
PCDHGB1Q9Y5G3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
PCDHGB1Q9Y5G3 DDX18P4-201ENST00000511690 1966 ntBASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 RNA5SP394-201ENST00000364216 119 ntBASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 RNU4-28P-201ENST00000364739 141 ntBASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 RNU6-1005P-201ENST00000384519 107 ntBASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 AL390316.1-201ENST00000406279 553 ntBASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 RAB9AP4-201ENST00000415230 609 ntBASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 AL662874.1-201ENST00000426065 230 ntBASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 GSTM5P1-201ENST00000434751 660 ntBASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 RPS11P7-201ENST00000442125 465 ntBASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 AC104629.2-201ENST00000468627 598 ntBASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 AC108751.2-201ENST00000469993 231 ntBASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 OR2AO1P-201ENST00000476497 403 ntBASIC4.71□□□□□ -1.66
PCDHGB1Q9Y5G3 AC058823.1-201ENST00000485315 474 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms