Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
VTA1Q9NP79 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 AC092747.4-201ENST00000620519 1861 ntBASIC5.99□□□□□ -1.45
VTA1Q9NP79 AC114774.1-201ENST00000507410 1770 ntBASIC5.99□□□□□ -1.45
VTA1Q9NP79 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VTA1Q9NP79 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VTA1Q9NP79 SNURFL-201ENST00000309296 343 ntBASIC5.99□□□□□ -1.45
VTA1Q9NP79 RNU6-77P-201ENST00000410554 91 ntBASIC5.99□□□□□ -1.45
VTA1Q9NP79 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VTA1Q9NP79 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 AC092647.2-201ENST00000452998 253 ntBASIC5.99□□□□□ -1.45
VTA1Q9NP79 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 AC073522.1-201ENST00000483312 377 ntBASIC5.99□□□□□ -1.45
VTA1Q9NP79 RPS3AP22-201ENST00000488297 769 ntBASIC5.99□□□□□ -1.45
VTA1Q9NP79 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VTA1Q9NP79 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 C1GALT1P3-201ENST00000522049 819 ntBASIC5.99□□□□□ -1.45
VTA1Q9NP79 AC010306.1-201ENST00000523223 1117 ntBASIC5.99□□□□□ -1.45
VTA1Q9NP79 AP003461.1-201ENST00000528866 78 ntBASIC5.99□□□□□ -1.45
VTA1Q9NP79 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VTA1Q9NP79 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VTA1Q9NP79 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 MTCYBP27-201ENST00000555160 670 ntBASIC5.99□□□□□ -1.45
VTA1Q9NP79 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 Z94722.1-201ENST00000604328 474 ntBASIC5.99□□□□□ -1.45
VTA1Q9NP79 AL139344.1-201ENST00000605228 195 ntBASIC5.99□□□□□ -1.45
VTA1Q9NP79 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 AL353662.3-201ENST00000625131 237 ntBASIC5.99□□□□□ -1.45
VTA1Q9NP79 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 MIR3974-201ENST00000637126 96 ntBASIC5.99□□□□□ -1.45
VTA1Q9NP79 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
VTA1Q9NP79 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VTA1Q9NP79 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VTA1Q9NP79 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 THAP12P4-201ENST00000528321 2266 ntBASIC5.99□□□□□ -1.45
VTA1Q9NP79 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
VTA1Q9NP79 AC004656.1-201ENST00000568479 4951 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
VTA1Q9NP79 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.98□□□□□ -1.45
VTA1Q9NP79 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VTA1Q9NP79 RN7SKP103-201ENST00000363848 320 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.98□□□□□ -1.45
VTA1Q9NP79 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
VTA1Q9NP79 MIR600-201ENST00000385007 98 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 TMSB4XP8-201ENST00000402089 135 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 RN7SKP216-201ENST00000411050 312 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 TMSB4XP6-201ENST00000415187 135 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 TRGV6-201ENST00000417928 299 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.98□□□□□ -1.45
VTA1Q9NP79 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.98□□□□□ -1.45
VTA1Q9NP79 TMSB4XP1-201ENST00000424567 135 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 GTF2IP7-202ENST00000436677 309 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 AC006466.1-201ENST00000438721 289 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.98□□□□□ -1.45
VTA1Q9NP79 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.98□□□□□ -1.45
VTA1Q9NP79 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.98□□□□□ -1.45
VTA1Q9NP79 MRPL42P4-201ENST00000453267 443 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 AC079168.1-201ENST00000458741 345 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 AC097484.1-201ENST00000471148 389 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 GAPDHP39-201ENST00000481866 979 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 RPL5P23-201ENST00000496040 868 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.98□□□□□ -1.45
VTA1Q9NP79 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.98□□□□□ -1.45
VTA1Q9NP79 AC023632.1-201ENST00000518463 375 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.98□□□□□ -1.45
VTA1Q9NP79 OR5AZ1P-201ENST00000527448 943 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 OR8G3P-201ENST00000533406 921 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 PCNPP1-201ENST00000552501 511 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 AC044913.1-201ENST00000557200 430 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.98□□□□□ -1.45
VTA1Q9NP79 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.98□□□□□ -1.45
VTA1Q9NP79 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.98□□□□□ -1.45
VTA1Q9NP79 AL360219.1-201ENST00000610230 366 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 MIR6748-201ENST00000610433 71 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 MIR6798-201ENST00000612887 67 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 AL353726.1-201ENST00000614041 1000 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.98□□□□□ -1.45
VTA1Q9NP79 AC100827.5-201ENST00000615883 426 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms